Domain ID e5oa1B3

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  • A: a+b complex topology
  • X: barrel domain in beta subunit of DNA dependent RNA-polymerase
  • H: barrel domain in beta subunit of DNA dependent RNA-polymerase
  • T: barrel domain in beta subunit of DNA dependent RNA-polymerase
  • F: RNA_pol_Rpb2_6
UID: 002095811
Type: Automatic domain
Parent: e4c2mB4
Range: B:647-761
PDB: 5oa1
PDB Description: DNA-directed RNA polymerase I subunit RPA135
UniProt: P22138
Hsap BLAST neighbor: Q9H9Y6
Species:

Structure of domain e5oa1B3

Domains in the same chain:

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e5oa1B1 B:12-209,B:401-547 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e5oa1B7 B:210-400 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e5oa1B2 B:548-646 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e5oa1B3 B:647-761 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e5oa1B6 B:762-798,B:912-1040 cradle loop barrel RIFT-related double psi
e5oa1B5 B:799-911 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e5oa1B4 B:1041-1203 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase

Domains in the same PDB:

e5oa1A5 A:1-141,A:172-270,A:312-463 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e5oa1A6 A:464-505,A:581-665 cradle loop barrel RIFT-related double psi
e5oa1A9 A:506-580 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e5oa1A2 A:666-826 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e5oa1A4 A:827-1053 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e5oa1A1 A:1054-1180 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase I RPA190 subunit third helical domain in yeast RNA-polymerase I RPA190 subunit
e5oa1A7 A:1181-1234,A:1545-1663 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e5oa1A3 A:1235-1261,A:1498-1544 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e5oa1A8 A:1262-1338,A:1438-1497 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e5oa1B1 B:12-209,B:401-547 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e5oa1B7 B:210-400 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e5oa1B2 B:548-646 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e5oa1B3 B:647-761 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e5oa1B6 B:762-798,B:912-1040 cradle loop barrel RIFT-related double psi
e5oa1B5 B:799-911 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e5oa1B4 B:1041-1203 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e5oa1C1 C:30-75,C:222-335 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e5oa1C2 C:76-221 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e5oa1D1 D:12-49,D:80-100 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e5oa1E2 E:1-143 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e5oa1E1 E:144-215 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e5oa1F1 F:55-154 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e5oa1G2 G:8-126 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e5oa1G1 G:127-174,G:215-251 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5oa1H1 H:3-146 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5oa1I1 I:2-67 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5oa1I2 I:68-125 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5oa1J1 J:1-69 HTH RPB10 RPB10
e5oa1K1 K:40-142 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e5oa1L1 L:26-70 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5oa1M1 M:8-114 triple barrel triple barrel RNA polymerase I subunits A49/A34.5 dimerization domains
e5oa1N1 N:23-180 triple barrel triple barrel RNA polymerase I subunits A49/A34.5 dimerization domains
e5oa1O1 O:48-248,O:324-551,O:581-614 Repetitive alpha hairpins ARM repeat ARM repeat