ECOD: domain e5tgaS42

Domain ID e5tgaS42

A: a+b two layers
X: beta-Grasp
H: Ubiquitin-related
T: Alpha-L RNA-binding motif
F: Ribosomal_S4e,S4,RS4NT

UID:	001922838
Type:	Automatic domain
Parent:	e8cdlh1
Range:	S4:2-116
Ligands:	C MG PRO
PDB:	5tga
PDB Description:	40S ribosomal protein S4-A
UniProt:	P0CX35
Hsap BLAST neighbor:	P62701
Species:	Saccharomyces cerevisiae

Domain
In chain context
In PDB context

Structure of domain e5tgaS42

Domains in the same chain:

Download Pymol

e5tgaS41	S4:117-175	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5tgaS42	S4:2-116	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e5tgaS43	S4:176-261	SH3	SH3	SH3

Domains in the same PDB:

e5tgac01	c0:1-98	HTH	HTH	winged
e5tgaC01	C0:1-96	HTH	HTH	winged
e5tgac11	c1:2-147	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5tgaC11	C1:2-156	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5tgac21	c2:20-143	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5tgaC21	C2:20-143	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5tgac31	c3:2-82	HTH	40S ribosomal protein S13 N-terminal domain	40S ribosomal protein S13 N-terminal domain
e5tgac32	c3:83-151	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e5tgaC31	C3:83-151	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e5tgaC32	C3:2-82	HTH	40S ribosomal protein S13 N-terminal domain	40S ribosomal protein S13 N-terminal domain
e5tgac41	c4:10-137	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e5tgaC41	C4:11-137	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e5tgac51	c5:4-138	Ribosomal protein S19	Ribosomal protein S19	Ribosomal protein S19
e5tgaC51	C5:8-131	Ribosomal protein S19	Ribosomal protein S19	Ribosomal protein S19
e5tgac61	c6:2-143	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e5tgaC61	C6:3-143	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e5tgac71	c7:2-122	HTH	HTH	FF domain
e5tgaC71	C7:2-126	HTH	HTH	FF domain
e5tgac81	c8:2-146	HhH/H2TH	H2TH	H2TH
e5tgaC81	C8:2-146	HhH/H2TH	H2TH	H2TH
e5tgac91	c9:2-144	HTH	HTH	winged
e5tgaC91	C9:2-144	HTH	HTH	winged
e5tgad01	d0:12-121	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e5tgaD01	D0:15-121	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e5tgad11	d1:1-87	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)
e5tgaD11	D1:1-87	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)
e5tgad21	d2:68-130	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e5tgad22	d2:2-67	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e5tgaD22	D2:2-67	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e5tgaD21	D2:68-130	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e5tgad31	d3:2-145	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5tgaD31	D3:2-145	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5tgad41	d4:2-135	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e5tgaD41	D4:2-135	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e5tgad51	d5:37-105	HTH	HTH	winged
e5tgaD51	D5:36-105	HTH	HTH	winged
e5tgad61	d6:2-98	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5tgaD61	D6:2-98	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5tgad71	d7:2-82	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5tgaD71	D7:2-82	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5tgad81	d8:5-67	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5tgaD81	D8:5-67	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5tgad91	d9:4-56	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5tgaD91	D9:4-56	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5tgae01	e0:2-63	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)
e5tgaE01	E0:2-61	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)
e5tgae11	e1:77-152	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5tgaE11	E1:82-152	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5tgal21	l2:99-253	SH3	SH3	SH3
e5tgal22	l2:2-98	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5tgaL22	L2:99-253	SH3	SH3	SH3
e5tgaL21	L2:2-98	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5tgal31	l3:2-387	cradle loop barrel	RIFT-related	Alanine racemase-C
e5tgaL31	L3:2-387	cradle loop barrel	RIFT-related	Alanine racemase-C
e5tgal42	l4:270-362	C-terminal helical region in 60S ribosomal protein L4 (L4p)	C-terminal helical region in 60S ribosomal protein L4 (L4p)	C-terminal helical region in 60S ribosomal protein L4 (L4p)
e5tgal41	l4:2-269	Ribosomal protein L4	Ribosomal protein L4	Ribosomal protein L4
e5tgaL41	L4:2-269	Ribosomal protein L4	Ribosomal protein L4	Ribosomal protein L4
e5tgaL42	L4:270-362	C-terminal helical region in 60S ribosomal protein L4 (L4p)	C-terminal helical region in 60S ribosomal protein L4 (L4p)	C-terminal helical region in 60S ribosomal protein L4 (L4p)
e5tgal51	l5:4-297	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e5tgaL51	L5:2-297	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e5tgal61	l6:2-176	SH3	SH3	SH3
e5tgaL61	L6:2-109,L6:129-176	SH3	SH3	SH3
e5tgal71	l7:22-244	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e
e5tgaL71	L7:23-244	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e
e5tgal81	l8:24-254	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5tgaL81	L8:24-256	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5tgal91	l9:86-191	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e5tgal92	l9:1-85	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e5tgaL92	L9:1-85	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e5tgaL91	L9:86-191	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e5tgam01	m0:2-221	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal protein L10e
e5tgaM01	M0:2-221	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal protein L10e
e5tgam11	m1:6-174	Ribosomal protein L5	Ribosomal protein L5	Ribosomal protein L5
e5tgaM11	M1:6-174	Ribosomal protein L5	Ribosomal protein L5	Ribosomal protein L5
e5tgam31	m3:2-195	RPL13	RPL13	RPL13
e5tgaM31	M3:2-194	RPL13	RPL13	RPL13
e5tgam41	m4:2-138	SH3	SH3	SH3
e5tgaM41	M4:3-138	SH3	SH3	SH3
e5tgam51	m5:2-204	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e5tgaM51	M5:2-204	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e5tgam61	m6:3-199	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L13 and L16-A	Ribosomal protein L13 and L16-A
e5tgaM61	M6:3-199	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L13 and L16-A	Ribosomal protein L13 and L16-A
e5tgam71	m7:2-156	Enolase-N/ribosomal protein	Ribosomal protein L22	Ribosomal protein L22
e5tgaM71	M7:2-184	Enolase-N/ribosomal protein	Ribosomal protein L22	Ribosomal protein L22
e5tgam81	m8:2-186	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e5tgaM81	M8:2-186	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e5tgam91	m9:2-56	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain
e5tgam92	m9:57-189	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain
e5tgaM91	M9:2-56	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain
e5tgaM92	M9:57-189	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain
e5tgan02	n0:1-69	GP2-like	RplX-like	RplX-like
e5tgan01	n0:70-172	GP2-like	RplX-like	RplX-like
e5tgaN02	N0:70-172	GP2-like	RplX-like	RplX-like
e5tgaN01	N0:1-69	GP2-like	RplX-like	RplX-like
e5tgan11	n1:2-160	SH3	SH3	SH3
e5tgaN11	N1:2-160	SH3	SH3	SH3
e5tgan21	n2:11-108	Ribosomal protein L22e	Ribosomal protein L22e	Ribosomal protein L22e
e5tgaN21	N2:9-108	Ribosomal protein L22e	Ribosomal protein L22e	Ribosomal protein L22e
e5tgan31	n3:2-137	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e5tgaN31	N3:2-137	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e5tgan41	n4:1-135	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5tgaN41	N4:1-98	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5tgan51	n5:23-142	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e5tgaN51	N5:22-142	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e5tgan61	n6:2-127	SH3	SH3	SH3
e5tgaN61	N6:2-127	SH3	SH3	SH3
e5tgan71	n7:2-136	SH3	SH3	SH3
e5tgaN71	N7:2-136	SH3	SH3	SH3
e5tgan81	n8:2-149	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e5tgaN81	N8:2-149	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e5tgan91	n9:2-59	RPL29	RPL29	RPL29
e5tgaN91	N9:2-59	RPL29	RPL29	RPL29
e5tgao01	o0:6-105	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5tgaO01	O0:9-105	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5tgao11	o1:4-112	Ribosomal protein L31e-like	Ribosomal protein L31e/gp120 outer domain	Ribosomal protein L31e/gp120 outer domain
e5tgaO11	O1:4-112	Ribosomal protein L31e-like	Ribosomal protein L31e/gp120 outer domain	Ribosomal protein L31e/gp120 outer domain
e5tgao21	o2:2-128	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L32e	Ribosomal protein L32e
e5tgaO21	O2:2-128	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L32e	Ribosomal protein L32e
e5tgao31	o3:2-107	cradle loop barrel	RIFT-related	Alanine racemase-C
e5tgaO31	O3:2-107	cradle loop barrel	RIFT-related	Alanine racemase-C
e5tgao41	o4:2-113	Glucocorticoid receptor-like	RPL34	RPL34
e5tgaO41	O4:2-113	Glucocorticoid receptor-like	RPL34	RPL34
e5tgao51	o5:2-120	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)
e5tgaO51	O5:2-120	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)
e5tgao61	o6:24-100	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)
e5tgaO61	O6:24-100	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)
e5tgao71	o7:2-88	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5tgaO71	O7:2-88	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5tgao81	o8:2-78	SRP9/14-like	Signal recognition particle alu RNA binding heterodimer SRP9/14-related	Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e5tgaO81	O8:2-78	SRP9/14-like	Signal recognition particle alu RNA binding heterodimer SRP9/14-related	Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e5tgao91	o9:2-51	Ribosomal protein L39e	Ribosomal protein L39e	Ribosomal protein L39e
e5tgaO91	O9:2-51	Ribosomal protein L39e	Ribosomal protein L39e	Ribosomal protein L39e
e5tgap01	p0:3-107,p0:184-199	Alpha-beta plaits	Ribosomal protein L10-like	Ribosomal protein L10-like
e5tgaq01	q0:77-128	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5tgaQ01	Q0:77-128	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5tgaq11	q1:1-25	Ribosomal protein L41-A	Ribosomal protein L41-A	Ribosomal protein L41-A
e5tgaQ11	Q1:1-25	Ribosomal protein L41-A	Ribosomal protein L41-A	Ribosomal protein L41-A
e5tgaq21	q2:2-106	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5tgaQ21	Q2:2-106	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5tgaq31	q3:2-92	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5tgaQ31	Q3:2-92	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5tgas01	s0:2-207	Flavodoxin-like	Ribosomal protein S2/SIS domain	Ribosomal protein S2/SIS domain
e5tgaS01	S0:2-207	Flavodoxin-like	Ribosomal protein S2/SIS domain	Ribosomal protein S2/SIS domain
e5tgas11	s1:20-113	Ribosomal protein L25-like	40S ribosomal protein S3A N-terminal domain	40S ribosomal protein S3A N-terminal domain
e5tgas12	s1:114-235	T-fold	40S ribosomal protein S3A C-terminal domain	40S ribosomal protein S3A C-terminal domain
e5tgaS11	S1:20-113	Ribosomal protein L25-like	40S ribosomal protein S3A N-terminal domain	40S ribosomal protein S3A N-terminal domain
e5tgaS12	S1:114-233	T-fold	40S ribosomal protein S3A C-terminal domain	40S ribosomal protein S3A C-terminal domain
e5tgas22	s2:176-250	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e5tgas21	s2:109-175	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e5tgas23	s2:34-108	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)
e5tgaS21	S2:176-250	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e5tgaS23	S2:109-175	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e5tgaS22	S2:34-108	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)
e5tgas31	s3:92-225	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e5tgas32	s3:3-91	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e5tgaS32	S3:3-91	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e5tgaS31	S3:92-225	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e5tgas41	s4:117-175	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5tgas43	s4:2-116	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e5tgas42	s4:176-261	SH3	SH3	SH3
e5tgaS42	S4:2-116	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e5tgaS43	S4:176-261	SH3	SH3	SH3
e5tgaS41	S4:117-175	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5tgas51	s5:20-225	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e5tgaS51	S5:20-225	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e5tgas61	s6:1-218	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein L25-like
e5tgaS61	S6:1-226	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein L25-like
e5tgas72	s7:2-105	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e5tgas71	s7:106-187	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e5tgaS71	S7:4-105	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e5tgaS72	S7:106-187	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e5tgas81	s8:2-200	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e5tgaS81	S8:2-200	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e5tgas91	s9:2-186	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e5tgaS91	S9:2-186	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e5tgaSM1	SM:9-141	Suppressor protein STM1	Suppressor protein STM1	Suppressor protein STM1
e5tgasR1	sR:2-319	beta-propeller-like	beta-propeller	7-bladed
e5tgaSR1	SR:2-319	beta-propeller-like	beta-propeller	7-bladed