ECOD: domain e5tgmq21

Domain ID e5tgmq21

A: few secondary structure elements
X: Rubredoxin-like
H: Rubredoxin-related
T: Rubredoxin-related
F: Ribosomal_L44

UID:	002027888
Type:	Automatic domain
Parent:	e1vqo31
Range:	q2:2-106
Ligands:	LEU MG OHX PHE ZN
PDB:	5tgm
PDB Description:	60S ribosomal protein L42-A
UniProt:	P0CX27
Hsap BLAST neighbor:	P83881
Species:	Saccharomyces cerevisiae

Domains in the same chain:

Download Pymol

e5tgmq21	q2:2-106	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related

Domains in the same PDB:

e5tgmc01	c0:1-98	HTH	HTH	winged
e5tgmC01	C0:1-96	HTH	HTH	winged
e5tgmc11	c1:2-147	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5tgmC11	C1:2-156	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5tgmc21	c2:20-143	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5tgmC21	C2:20-143	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5tgmc32	c3:83-151	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e5tgmc31	c3:2-82	HTH	40S ribosomal protein S13 N-terminal domain	40S ribosomal protein S13 N-terminal domain
e5tgmC31	C3:83-151	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e5tgmC32	C3:2-82	HTH	40S ribosomal protein S13 N-terminal domain	40S ribosomal protein S13 N-terminal domain
e5tgmc41	c4:10-137	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e5tgmC41	C4:11-137	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e5tgmc51	c5:4-138	Ribosomal protein S19	Ribosomal protein S19	Ribosomal protein S19
e5tgmC51	C5:8-131	Ribosomal protein S19	Ribosomal protein S19	Ribosomal protein S19
e5tgmc61	c6:2-143	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e5tgmC61	C6:3-143	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e5tgmc71	c7:2-122	HTH	HTH	FF domain
e5tgmC71	C7:2-126	HTH	HTH	FF domain
e5tgmc81	c8:2-66,c8:90-146	HhH/H2TH	H2TH	H2TH
e5tgmC81	C8:2-66,C8:90-146	HhH/H2TH	H2TH	H2TH
e5tgmc91	c9:2-144	HTH	HTH	winged
e5tgmC91	C9:2-144	HTH	HTH	winged
e5tgmd01	d0:12-121	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e5tgmD01	D0:15-121	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e5tgmd11	d1:1-87	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)
e5tgmD11	D1:1-87	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)
e5tgmd22	d2:2-67	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e5tgmd21	d2:68-130	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e5tgmD22	D2:2-67	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e5tgmD21	D2:68-130	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e5tgmd31	d3:2-145	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5tgmD31	D3:2-145	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5tgmd41	d4:2-135	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e5tgmD41	D4:2-135	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e5tgmd51	d5:37-105	HTH	HTH	winged
e5tgmD51	D5:36-105	HTH	HTH	winged
e5tgmd61	d6:2-98	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5tgmD61	D6:2-98	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5tgmd71	d7:30-82	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5tgmD71	D7:30-82	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5tgmd81	d8:5-67	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5tgmD81	D8:5-67	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5tgmd91	d9:4-56	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5tgmD91	D9:4-56	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5tgme01	e0:2-63	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)
e5tgmE01	E0:2-61	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)
e5tgme11	e1:77-152	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5tgmE11	E1:82-152	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5tgml21	l2:99-253	SH3	SH3	SH3
e5tgml22	l2:2-98	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5tgmL22	L2:2-98	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5tgmL21	L2:99-253	SH3	SH3	SH3
e5tgml31	l3:2-366	cradle loop barrel	RIFT-related	Alanine racemase-C
e5tgmL31	L3:2-387	cradle loop barrel	RIFT-related	Alanine racemase-C
e5tgml42	l4:270-362	C-terminal helical region in 60S ribosomal protein L4 (L4p)	C-terminal helical region in 60S ribosomal protein L4 (L4p)	C-terminal helical region in 60S ribosomal protein L4 (L4p)
e5tgml41	l4:2-269	Ribosomal protein L4	Ribosomal protein L4	Ribosomal protein L4
e5tgmL41	L4:2-269	Ribosomal protein L4	Ribosomal protein L4	Ribosomal protein L4
e5tgmL42	L4:270-362	C-terminal helical region in 60S ribosomal protein L4 (L4p)	C-terminal helical region in 60S ribosomal protein L4 (L4p)	C-terminal helical region in 60S ribosomal protein L4 (L4p)
e5tgml51	l5:4-297	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e5tgmL51	L5:2-297	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e5tgml61	l6:2-176	SH3	SH3	SH3
e5tgmL61	L6:2-109,L6:129-176	SH3	SH3	SH3
e5tgml71	l7:22-244	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e
e5tgmL71	L7:23-244	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e
e5tgml81	l8:24-254	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5tgmL81	L8:24-256	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5tgml92	l9:1-85	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e5tgml91	l9:86-191	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e5tgmL91	L9:86-191	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e5tgmL92	L9:1-85	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e5tgmm01	m0:2-221	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal protein L10e
e5tgmM01	M0:2-221	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal protein L10e
e5tgmm11	m1:6-112,m1:132-174	Ribosomal protein L5	Ribosomal protein L5	Ribosomal protein L5
e5tgmM11	M1:6-112,M1:132-174	Ribosomal protein L5	Ribosomal protein L5	Ribosomal protein L5
e5tgmm31	m3:2-195	RPL13	RPL13	RPL13
e5tgmM31	M3:2-194	RPL13	RPL13	RPL13
e5tgmm41	m4:2-138	SH3	SH3	SH3
e5tgmM41	M4:3-138	SH3	SH3	SH3
e5tgmm51	m5:2-175	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e5tgmM51	M5:2-175	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e5tgmm61	m6:3-199	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L13 and L16-A	Ribosomal protein L13 and L16-A
e5tgmM61	M6:3-199	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L13 and L16-A	Ribosomal protein L13 and L16-A
e5tgmm71	m7:2-156	Enolase-N/ribosomal protein	Ribosomal protein L22	Ribosomal protein L22
e5tgmM71	M7:2-184	Enolase-N/ribosomal protein	Ribosomal protein L22	Ribosomal protein L22
e5tgmm81	m8:2-186	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e5tgmM81	M8:2-186	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e5tgmm91	m9:2-56	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain
e5tgmm92	m9:57-189	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain
e5tgmM91	M9:57-189	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain
e5tgmM92	M9:2-56	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain
e5tgmn02	n0:1-69	GP2-like	RplX-like	RplX-like
e5tgmn01	n0:70-172	GP2-like	RplX-like	RplX-like
e5tgmN02	N0:70-172	GP2-like	RplX-like	RplX-like
e5tgmN01	N0:1-69	GP2-like	RplX-like	RplX-like
e5tgmn11	n1:2-160	SH3	SH3	SH3
e5tgmN11	N1:2-160	SH3	SH3	SH3
e5tgmn21	n2:11-108	Ribosomal protein L22e	Ribosomal protein L22e	Ribosomal protein L22e
e5tgmN21	N2:9-108	Ribosomal protein L22e	Ribosomal protein L22e	Ribosomal protein L22e
e5tgmn31	n3:2-137	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e5tgmN31	N3:2-137	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e5tgmn41	n4:1-135	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5tgmN41	N4:1-98	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5tgmn51	n5:23-142	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e5tgmN51	N5:22-142	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e5tgmn61	n6:2-127	SH3	SH3	SH3
e5tgmN61	N6:2-127	SH3	SH3	SH3
e5tgmn71	n7:2-136	SH3	SH3	SH3
e5tgmN71	N7:2-136	SH3	SH3	SH3
e5tgmn81	n8:2-149	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e5tgmN81	N8:2-149	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e5tgmn91	n9:2-59	RPL29	RPL29	RPL29
e5tgmN91	N9:2-59	RPL29	RPL29	RPL29
e5tgmo01	o0:6-105	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5tgmO01	O0:9-105	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5tgmo11	o1:4-112	Ribosomal protein L31e-like	Ribosomal protein L31e/gp120 outer domain	Ribosomal protein L31e/gp120 outer domain
e5tgmO11	O1:4-112	Ribosomal protein L31e-like	Ribosomal protein L31e/gp120 outer domain	Ribosomal protein L31e/gp120 outer domain
e5tgmo21	o2:2-128	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L32e	Ribosomal protein L32e
e5tgmO21	O2:2-128	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L32e	Ribosomal protein L32e
e5tgmo31	o3:2-107	cradle loop barrel	RIFT-related	Alanine racemase-C
e5tgmO31	O3:2-107	cradle loop barrel	RIFT-related	Alanine racemase-C
e5tgmo41	o4:2-113	Glucocorticoid receptor-like	RPL34	RPL34
e5tgmO41	O4:2-113	Glucocorticoid receptor-like	RPL34	RPL34
e5tgmo51	o5:2-120	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)
e5tgmO51	O5:2-120	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)
e5tgmo61	o6:24-100	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)
e5tgmO61	O6:24-100	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)
e5tgmo71	o7:2-88	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5tgmO71	O7:2-88	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5tgmo81	o8:2-78	SRP9/14-like	Signal recognition particle alu RNA binding heterodimer SRP9/14-related	Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e5tgmO81	O8:2-78	SRP9/14-like	Signal recognition particle alu RNA binding heterodimer SRP9/14-related	Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e5tgmo91	o9:2-51	Ribosomal protein L39e	Ribosomal protein L39e	Ribosomal protein L39e
e5tgmO91	O9:2-51	Ribosomal protein L39e	Ribosomal protein L39e	Ribosomal protein L39e
e5tgmp01	p0:3-198	Alpha-beta plaits	Ribosomal protein L10-like	Ribosomal protein L10-like
e5tgmq01	q0:77-128	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5tgmQ01	Q0:77-128	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5tgmq11	q1:1-25	Ribosomal protein L41-A	Ribosomal protein L41-A	Ribosomal protein L41-A
e5tgmQ11	Q1:1-25	Ribosomal protein L41-A	Ribosomal protein L41-A	Ribosomal protein L41-A
e5tgmq21	q2:2-106	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5tgmQ21	Q2:2-106	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5tgmq31	q3:2-92	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5tgmQ31	Q3:2-92	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5tgms01	s0:2-207	Flavodoxin-like	Ribosomal protein S2/SIS domain	Ribosomal protein S2/SIS domain
e5tgmS01	S0:2-207	Flavodoxin-like	Ribosomal protein S2/SIS domain	Ribosomal protein S2/SIS domain
e5tgms11	s1:20-113	Ribosomal protein L25-like	40S ribosomal protein S3A N-terminal domain	40S ribosomal protein S3A N-terminal domain
e5tgms12	s1:114-235	T-fold	40S ribosomal protein S3A C-terminal domain	40S ribosomal protein S3A C-terminal domain
e5tgmS12	S1:20-113	Ribosomal protein L25-like	40S ribosomal protein S3A N-terminal domain	40S ribosomal protein S3A N-terminal domain
e5tgmS11	S1:114-233	T-fold	40S ribosomal protein S3A C-terminal domain	40S ribosomal protein S3A C-terminal domain
e5tgms23	s2:176-250	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e5tgms22	s2:34-108	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)
e5tgms21	s2:109-175	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e5tgmS22	S2:109-175	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e5tgmS21	S2:176-250	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e5tgmS23	S2:34-108	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)
e5tgms32	s3:92-225	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e5tgms31	s3:3-91	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e5tgmS31	S3:3-91	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e5tgmS32	S3:92-225	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e5tgms42	s4:2-116	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e5tgms41	s4:117-175	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5tgms43	s4:176-261	SH3	SH3	SH3
e5tgmS43	S4:117-175	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5tgmS42	S4:2-116	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e5tgmS41	S4:176-261	SH3	SH3	SH3
e5tgms51	s5:20-225	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e5tgmS51	S5:20-225	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e5tgms61	s6:1-218	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein L25-like
e5tgmS61	S6:1-226	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein L25-like
e5tgms72	s7:106-187	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e5tgms71	s7:2-105	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e5tgmS71	S7:4-105	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e5tgmS72	S7:106-187	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e5tgms81	s8:2-200	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e5tgmS81	S8:2-200	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e5tgms91	s9:2-186	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e5tgmS91	S9:2-186	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e5tgmSM1	SM:9-141	Suppressor protein STM1	Suppressor protein STM1	Suppressor protein STM1
e5tgmsR1	sR:2-319	beta-propeller-like	beta-propeller	7-bladed
e5tgmSR1	SR:2-319	beta-propeller-like	beta-propeller	7-bladed