Domain ID e5tw1D1

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  • A: a+b complex topology
  • X: N-terminal domain in RNA-polymerase beta-prime subunit
  • H: N-terminal domain in RNA-polymerase beta-prime subunit
  • T: N-terminal domain in RNA-polymerase beta-prime subunit
  • F: RNA_pol_Rpb1_1
UID: 002417993
Type: Manual domain
Parent: e4jk2D1
Range: D:4-147,D:230-408
Ligands: EDO SO4 ZN
PDB: 5tw1
PDB Description: DNA-directed RNA polymerase subunit beta'
UniProt: A0QS66
Species:

Structure of domain e5tw1D1

Domains in the same chain:

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e5tw1D1 D:4-147,D:230-408 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e5tw1D2 D:409-452,D:493-573 cradle loop barrel RIFT-related double psi
e5tw1D3 D:453-492 inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit
e5tw1D4 D:574-729 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e5tw1D5 D:730-887 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e5tw1D6 D:888-973 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e5tw1D7 D:974-1010,D:1027-1042,D:1118-1283 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e5tw1D8 D:1043-1090,D:1098-1117 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif

Domains in the same PDB:

e5tw1A1 A:1-47,A:170-221 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e5tw1A2 A:48-169 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e5tw1B1 B:1-47,B:170-233 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e5tw1B2 B:48-169 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e5tw1C4 C:21-172,C:368-493 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e5tw1C3 C:173-367 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e5tw1C2 C:494-629 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e5tw1C7 C:630-700 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e5tw1C6 C:701-738,C:871-1026 cradle loop barrel RIFT-related double psi
e5tw1C1 C:739-870 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e5tw1C5 C:1027-1139 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e5tw1D1 D:4-147,D:230-408 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e5tw1D2 D:409-452,D:493-573 cradle loop barrel RIFT-related double psi
e5tw1D3 D:453-492 inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit
e5tw1D4 D:574-729 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e5tw1D5 D:730-887 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e5tw1D6 D:888-973 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e5tw1D7 D:974-1010,D:1027-1042,D:1118-1283 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e5tw1D8 D:1043-1090,D:1098-1117 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e5tw1E1 E:24-106 RPB6/omega subunit-like RPB6/omega subunit-like RNA polymerase omega subunit
e5tw1F1 F:163-301 Sigma2 domain-like Sigma2 domain of RNA polymerase sigma factors Sigma2 domain of RNA polymerase sigma factors
e5tw1F3 F:302-358 HTH HTH tri-helical
e5tw1F2 F:330-332,F:359-466 HTH HTH tri-helical
e5tw1J1 J:26-79 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5tw1T1 T:251-303 HhH/H2TH SAM/DNA-glycosylase SAM domain-like