Domain ID e5ui8M1

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  • A: alpha arrays
  • X: HTH
  • H: HTH
  • T: tri-helical
  • F: Sigma54_DBD,Sigma54_CBD
UID: 002032430
Type: Automatic domain
Parent: e5byhM3
Range: M:264-405
PDB: 5ui8
PDB Description: RNA polymerase sigma-54 factor
UniProt: A0A0J4U551
Species: Klebsiella pneumoniae

Structure of domain e5ui8M1

Domains in the same chain:

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e5ui8M3 M:20-55,M:112-116 RNA polymerase sigma-54 factor N-terminal region RNA polymerase sigma-54 factor N-terminal region RNA polymerase sigma-54 factor N-terminal region
e5ui8M4 M:117-263 HTH HTH Sigma54 core-binding domain
e5ui8M1 M:264-405 HTH HTH tri-helical
e5ui8M2 M:415-474 HTH HTH tri-helical

Domains in the same PDB:

e5ui8G1 G:6-52,G:179-236 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e5ui8G2 G:53-178 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e5ui8G3 G:237-327 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e5ui8H2 H:6-52,H:174-234 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e5ui8H1 H:53-173 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e5ui8I1 I:2-151,I:452-577 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e5ui8I2 I:152-226,I:337-451 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e5ui8I3 I:578-713 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e5ui8I4 I:714-790 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e5ui8I5 I:791-828,I:1060-1237 cradle loop barrel RIFT-related double psi
e5ui8I6 I:829-996,I:1010-1059 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e5ui8I7 I:1238-1341 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e5ui8J1 J:1-341 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e5ui8J5 J:334-498 cradle loop barrel RIFT-related double psi
e5ui8J2 J:499-638 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e5ui8J9 J:639-810 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e5ui8J3 J:811-894 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e5ui8J4 J:895-931,J:1214-1372 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e5ui8J7 J:932-1022 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e5ui8J8 J:1023-1131 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e5ui8J10 J:1135-1215 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e5ui8K1 K:2-80 RPB6/omega subunit-like RPB6/omega subunit-like RNA polymerase omega subunit
e5ui8M3 M:20-55,M:112-116 RNA polymerase sigma-54 factor N-terminal region RNA polymerase sigma-54 factor N-terminal region RNA polymerase sigma-54 factor N-terminal region
e5ui8M4 M:117-263 HTH HTH Sigma54 core-binding domain
e5ui8M1 M:264-405 HTH HTH tri-helical
e5ui8M2 M:415-474 HTH HTH tri-helical