Domain ID e5umdi1

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  • A: few secondary structure elements
  • X: Rubredoxin-like
  • H: Rubredoxin-related
  • T: Rubredoxin-related
  • F: Ribosomal_L44
UID: 002034389
Type: Automatic domain
Parent: e1vqo31
Range: i:2-96
Ligands: ZN
PDB: 5umd
PDB Description: 60S ribosomal protein L44
UniProt: O97231
Hsap BLAST neighbor: Q969Q0
Species:

Structure of domain e5umdi1

Domains in the same chain:

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e5umdi1 i:2-96 Rubredoxin-like Rubredoxin-related Rubredoxin-related

Domains in the same PDB:

e5umd01 0:8-69 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5umd11 1:2-146 SH3 SH3 SH3
e5umd21 2:2-119 RPL28 RPL28 RPL28
e5umd31 3:3-121 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e5umd41 4:2-67 RPL29 RPL29 RPL29
e5umd51 5:35-257 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e5umd61 6:8-105 Bacillus chorismate mutase-like L30e-like L30e-like
e5umd71 7:15-116 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e5umd81 8:2-126 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e5umd91 9:35-137 cradle loop barrel RIFT-related Alanine racemase-C
e5umda1 a:2-107 Glucocorticoid receptor-like RPL34 RPL34
e5umdb1 b:2-106 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e)
e5umdc1 c:2-90 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5umdd1 d:2-77 SRP9/14-like Signal recognition particle alu RNA binding heterodimer SRP9/14-related Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e5umdD1 D:2-97 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5umdD2 D:98-248 SH3 SH3 SH3
e5umde1 e:2-51 Ribosomal protein L39e Ribosomal protein L39e Ribosomal protein L39e
e5umdE1 E:2-381 cradle loop barrel RIFT-related Alanine racemase-C
e5umdf1 f:1-51 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5umdg1 g:3-39 Ribosomal protein L41-A Ribosomal protein L41-A Ribosomal protein L41-A
e5umdG1 G:8-166 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e5umdh1 h:2-86 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5umdH2 H:2-86 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5umdH1 H:87-186 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5umdi1 i:2-96 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5umdI1 I:9-221 SH3 SH3 SH3
e5umdJ1 J:40-283 Bacillus chorismate mutase-like L30e-like L30e-like
e5umdK1 K:1-201 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e5umdL1 L:2-212 RPL13 RPL13 RPL13
e5umdM1 M:8-139 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e5umdN1 N:5-150 SH3 SH3 SH3
e5umdO1 O:2-148 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e5umdP1 P:2-205 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5umdQ1 Q:2-206 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e5umdR1 R:5-250,R:271-293 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5umdS1 S:2-187 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e5umdT2 T:2-55 Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain
e5umdT1 T:56-182 Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain
e5umdU1 U:5-78 GP2-like RplX-like RplX-like
e5umdU2 U:79-184 GP2-like RplX-like RplX-like
e5umdV1 V:4-158 SH3 SH3 SH3
e5umdW1 W:4-154,W:185-203 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e5umdX1 X:40-136 Ribosomal protein L22e Ribosomal protein L22e Ribosomal protein L22e
e5umdY1 Y:88-188 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5umdZ1 Z:2-122 SH3 SH3 SH3