Domain ID e5vu5A5

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  • A: alpha bundles
  • X: "thumb" domain in bacteriophage RB69-like DNA polymerase I
  • H: "thumb" domain in bacteriophage RB69-like DNA polymerase I
  • T: "thumb" domain in bacteriophage RB69-like DNA polymerase I
  • F: DNA_pol_B
UID: 002148390
Type: Automatic domain
Parent: e1tgoA3
Range: A:591-756
PDB: 5vu5
PDB Description: DNA polymerase
UniProt: D0VWU9
Hsap BLAST neighbor: P09884
Species: Thermococcus kodakarensis

Structure of domain e5vu5A5

Domains in the same chain:

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e5vu5A4 A:1-33,A:115-131 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5vu5A1 A:34-114 Alpha-beta plaits Family B DNA polymerase insertion domain Family B DNA polymerase insertion domain
e5vu5A6 A:132-345 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5vu5A3 A:346-434,A:486-590 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e5vu5A2 A:435-485 "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I
e5vu5A5 A:591-756 "thumb" domain in bacteriophage RB69-like DNA polymerase I "thumb" domain in bacteriophage RB69-like DNA polymerase I "thumb" domain in bacteriophage RB69-like DNA polymerase I

Domains in the same PDB:

e5vu5A4 A:1-33,A:115-131 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5vu5A1 A:34-114 Alpha-beta plaits Family B DNA polymerase insertion domain Family B DNA polymerase insertion domain
e5vu5A6 A:132-345 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5vu5A3 A:346-434,A:486-590 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e5vu5A2 A:435-485 "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I
e5vu5A5 A:591-756 "thumb" domain in bacteriophage RB69-like DNA polymerase I "thumb" domain in bacteriophage RB69-like DNA polymerase I "thumb" domain in bacteriophage RB69-like DNA polymerase I