Domain ID e5yzgA6

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  • A: alpha complex topology
  • X: Pre-mRNA-splicing factor 8 N-terminal domain
  • H: Pre-mRNA-splicing factor 8 N-terminal domain
  • T: Pre-mRNA-splicing factor 8 N-terminal domain
  • F: PRO8NT,PROCN
UID: 002390473
Type: Automatic domain
Parent: e5ganA1
Range: A:25-810
Ligands: GTP I6P
PDB: 5yzg
PDB Description: Pre-mRNA-processing-splicing factor 8
UniProt: Q6P2Q9
Hsap BLAST neighbor: Q6P2Q9
Species: Homo sapiens

Structure of domain e5yzgA6

Domains in the same chain:

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e5yzgA6 A:25-810 Pre-mRNA-splicing factor 8 N-terminal domain Pre-mRNA-splicing factor 8 N-terminal domain Pre-mRNA-splicing factor 8 N-terminal domain
e5yzgA2 A:811-1182 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e5yzgA4 A:1183-1502 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e5yzgA1 A:1503-1754 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e5yzgA5 A:1755-2015 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5yzgA3 A:2067-2314 Cytidine deaminase-like Cytidine deaminase-like Cytidine deaminase-like

Domains in the same PDB:

e5yzg12 1:5-83 Alpha-beta plaits RNA-binding domain, RBD RNA-binding domain, RBD
e5yzg11 1:138-301 Cyclophilin-like Cyclophilin-like Cyclophilin-like
e5yzg22 2:102-433 beta-propeller-like beta-propeller 8-bladed
e5yzg21 2:489-646 Cyclophilin-like Cyclophilin-like Cyclophilin-like
e5yzg31 3:6-177 Cyclophilin-like Cyclophilin-like Cyclophilin-like
e5yzga1 a:3-79 SH3 SH3 SH3
e5yzgA6 A:25-810 Pre-mRNA-splicing factor 8 N-terminal domain Pre-mRNA-splicing factor 8 N-terminal domain Pre-mRNA-splicing factor 8 N-terminal domain
e5yzgA2 A:811-1182 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e5yzgA4 A:1183-1502 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e5yzgA1 A:1503-1754 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e5yzgA5 A:1755-2015 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5yzgA3 A:2067-2314 Cytidine deaminase-like Cytidine deaminase-like Cytidine deaminase-like
e5yzgb1 b:7-89 SH3 SH3 SH3
e5yzgc1 c:1-81 SH3 SH3 SH3
e5yzgd1 d:20-116 SH3 SH3 SH3
e5yzgD4 D:107-179 PWI domain-like Pre-mRNA-splicing helicase BRR2 plug domain Pre-mRNA-splicing helicase BRR2 plug domain
e5yzgD2 D:250-363 PWI domain-like PWI domain PWI domain
e5yzgD3 D:364-365,D:404-458 Pre-mRNA-splicing helicase BRR2 NC-clamp Pre-mRNA-splicing helicase BRR2 NC-clamp Pre-mRNA-splicing helicase BRR2 NC-clamp
e5yzgD12 D:459-682 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e5yzgD14 D:683-888 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e5yzgD13 D:889-992 HTH HTH winged
e5yzgD15 D:993-1124 Sec63 N-terminal subdomain-like Sec63 N-terminal subdomain-like Sec63 N-terminal subdomain-like
e5yzgD6 D:1125-1181 HhH/H2TH SAM-like subdomain in Sec63-like proteins SAM-like subdomain in Sec63-like proteins
e5yzgD7 D:1182-1294 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e5yzgD10 D:1295-1520 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e5yzgD8 D:1521-1723 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e5yzgD11 D:1724-1823 HTH HTH winged
e5yzgD5 D:1824-1955 Sec63 N-terminal subdomain-like Sec63 N-terminal subdomain-like Sec63 N-terminal subdomain-like
e5yzgD9 D:1956-2014 HhH/H2TH SAM-like subdomain in Sec63-like proteins SAM-like subdomain in Sec63-like proteins
e5yzgD1 D:2015-2125 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e5yzge1 e:14-92 SH3 SH3 SH3
e5yzgE1 E:58-356 beta-propeller-like beta-propeller 7-bladed
e5yzgf1 f:2-75 SH3 SH3 SH3
e5yzgg1 g:3-76 SH3 SH3 SH3
e5yzgh1 h:4-85 SH3 SH3 SH3
e5yzgi1 i:4-89 SH3 SH3 SH3
e5yzgI1 I:156-819 Repetitive alpha hairpins ARM repeat ARM repeat
e5yzgj1 j:1-82 SH3 SH3 SH3
e5yzgJ1 J:179-802 Repetitive alpha hairpins ARM repeat ARM repeat
e5yzgk1 k:20-116 SH3 SH3 SH3
e5yzgl1 l:14-92 SH3 SH3 SH3
e5yzgm1 m:2-75 SH3 SH3 SH3
e5yzgn1 n:4-76 SH3 SH3 SH3
e5yzgN1 N:1-143 Pre-mRNA-splicing factor BUD31 Pre-mRNA-splicing factor BUD31 Pre-mRNA-splicing factor BUD31
e5yzgo1 o:2-163 Single-stranded right-handed beta-helix Leucine-rich repeats Leucine-rich repeats
e5yzgO3 O:19-89 RING/U-box-like RING/U-box-like FYVE/PHD zinc finger
e5yzgO1 O:90-220 CCCH zinc finger CCCH zinc finger CCCH zinc finger
e5yzgO2 O:221-303 Alpha-beta plaits RNA-binding domain, RBD RNA-binding domain, RBD
e5yzgp1 p:3-96 Alpha-beta plaits RNA-binding domain, RBD RNA-binding domain, RBD
e5yzgQ3 Q:19-415 Repetitive alpha hairpins ARM repeat ARM repeat
e5yzgQ5 Q:416-492,Q:660-706,Q:795-1134 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e5yzgQ4 Q:493-659 cradle loop barrel RIFT-related Alanine racemase-C
e5yzgQ2 Q:707-753,Q:773-794 Spliceosomal helicase Aquarius insert domain Spliceosomal helicase Aquarius insert domain Spliceosomal helicase Aquarius insert domain
e5yzgQ1 Q:1135-1381 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e5yzgs1 s:68-134,s:195-504 beta-propeller-like beta-propeller 7-bladed
e5yzgS1 S:8-166 Cyclophilin-like Cyclophilin-like Cyclophilin-like
e5yzgT1 T:184-496 beta-propeller-like beta-propeller 7-bladed
e5yzgu1 u:22-242 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e5yzgu2 u:243-411 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e5yzgv1 v:5-148 Mago nashi protein Mago nashi protein Mago nashi protein
e5yzgV2 V:149-406 Repetitive alpha hairpins ARM repeat ARM repeat
e5yzgV1 V:448-648 Repetitive alpha hairpins ARM repeat ARM repeat
e5yzgw1 w:64-154 Alpha-beta plaits RNA-binding domain, RBD RNA-binding domain, RBD
e5yzgZ4 Z:471-707,Z:879-913 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e5yzgZ2 Z:708-878 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e5yzgZ3 Z:914-1061 Sec63 N-terminal subdomain-like Sec63 N-terminal subdomain-like Sec63 N-terminal subdomain-like
e5yzgZ1 Z:1062-1152 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins