ECOD: domain e5yzgD7

Domain ID e5yzgD7

A: beta sandwiches
X: Immunoglobulin-like beta-sandwich
H: Immunoglobulin-related
T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
F: Sec63

UID:	002390480
Type:	Automatic domain
Parent:	e5dcaA9
Range:	D:1182-1294
PDB:	5yzg
PDB Description:	U5 small nuclear ribonucleoprotein 200 kDa helicase
UniProt:	O75643
Hsap BLAST neighbor:	O75643
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e5yzgD4	D:107-179	PWI domain-like	Pre-mRNA-splicing helicase BRR2 plug domain	Pre-mRNA-splicing helicase BRR2 plug domain
e5yzgD2	D:250-363	PWI domain-like	PWI domain	PWI domain
e5yzgD3	D:364-365,D:404-458	Pre-mRNA-splicing helicase BRR2 NC-clamp	Pre-mRNA-splicing helicase BRR2 NC-clamp	Pre-mRNA-splicing helicase BRR2 NC-clamp
e5yzgD12	D:459-682	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5yzgD14	D:683-888	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5yzgD13	D:889-992	HTH	HTH	winged
e5yzgD15	D:993-1124	Sec63 N-terminal subdomain-like	Sec63 N-terminal subdomain-like	Sec63 N-terminal subdomain-like
e5yzgD6	D:1125-1181	HhH/H2TH	SAM-like subdomain in Sec63-like proteins	SAM-like subdomain in Sec63-like proteins
e5yzgD7	D:1182-1294	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e5yzgD10	D:1295-1520	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5yzgD8	D:1521-1723	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5yzgD11	D:1724-1823	HTH	HTH	winged
e5yzgD5	D:1824-1955	Sec63 N-terminal subdomain-like	Sec63 N-terminal subdomain-like	Sec63 N-terminal subdomain-like
e5yzgD9	D:1956-2014	HhH/H2TH	SAM-like subdomain in Sec63-like proteins	SAM-like subdomain in Sec63-like proteins
e5yzgD1	D:2015-2125	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e5yzg12	1:5-83	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e5yzg11	1:138-301	Cyclophilin-like	Cyclophilin-like	Cyclophilin-like
e5yzg22	2:102-433	beta-propeller-like	beta-propeller	8-bladed
e5yzg21	2:489-646	Cyclophilin-like	Cyclophilin-like	Cyclophilin-like
e5yzg31	3:6-177	Cyclophilin-like	Cyclophilin-like	Cyclophilin-like
e5yzga1	a:3-79	SH3	SH3	SH3
e5yzgA6	A:25-810	Pre-mRNA-splicing factor 8 N-terminal domain	Pre-mRNA-splicing factor 8 N-terminal domain	Pre-mRNA-splicing factor 8 N-terminal domain
e5yzgA2	A:811-1182	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e5yzgA4	A:1183-1502	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases
e5yzgA1	A:1503-1754	Restriction endonuclease-like	Restriction endonuclease-like	Restriction endonuclease-like
e5yzgA5	A:1755-2015	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e5yzgA3	A:2067-2314	Cytidine deaminase-like	Cytidine deaminase-like	Cytidine deaminase-like
e5yzgb1	b:7-89	SH3	SH3	SH3
e5yzgc1	c:1-81	SH3	SH3	SH3
e5yzgd1	d:20-116	SH3	SH3	SH3
e5yzgD4	D:107-179	PWI domain-like	Pre-mRNA-splicing helicase BRR2 plug domain	Pre-mRNA-splicing helicase BRR2 plug domain
e5yzgD2	D:250-363	PWI domain-like	PWI domain	PWI domain
e5yzgD3	D:364-365,D:404-458	Pre-mRNA-splicing helicase BRR2 NC-clamp	Pre-mRNA-splicing helicase BRR2 NC-clamp	Pre-mRNA-splicing helicase BRR2 NC-clamp
e5yzgD12	D:459-682	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5yzgD14	D:683-888	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5yzgD13	D:889-992	HTH	HTH	winged
e5yzgD15	D:993-1124	Sec63 N-terminal subdomain-like	Sec63 N-terminal subdomain-like	Sec63 N-terminal subdomain-like
e5yzgD6	D:1125-1181	HhH/H2TH	SAM-like subdomain in Sec63-like proteins	SAM-like subdomain in Sec63-like proteins
e5yzgD7	D:1182-1294	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e5yzgD10	D:1295-1520	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5yzgD8	D:1521-1723	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5yzgD11	D:1724-1823	HTH	HTH	winged
e5yzgD5	D:1824-1955	Sec63 N-terminal subdomain-like	Sec63 N-terminal subdomain-like	Sec63 N-terminal subdomain-like
e5yzgD9	D:1956-2014	HhH/H2TH	SAM-like subdomain in Sec63-like proteins	SAM-like subdomain in Sec63-like proteins
e5yzgD1	D:2015-2125	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e5yzge1	e:14-92	SH3	SH3	SH3
e5yzgE1	E:58-356	beta-propeller-like	beta-propeller	7-bladed
e5yzgf1	f:2-75	SH3	SH3	SH3
e5yzgg1	g:3-76	SH3	SH3	SH3
e5yzgh1	h:4-85	SH3	SH3	SH3
e5yzgi1	i:4-89	SH3	SH3	SH3
e5yzgI1	I:156-819	Repetitive alpha hairpins	ARM repeat	ARM repeat
e5yzgj1	j:1-82	SH3	SH3	SH3
e5yzgJ1	J:179-802	Repetitive alpha hairpins	ARM repeat	ARM repeat
e5yzgk1	k:20-116	SH3	SH3	SH3
e5yzgl1	l:14-92	SH3	SH3	SH3
e5yzgm1	m:2-75	SH3	SH3	SH3
e5yzgn1	n:4-76	SH3	SH3	SH3
e5yzgN1	N:1-143	Pre-mRNA-splicing factor BUD31	Pre-mRNA-splicing factor BUD31	Pre-mRNA-splicing factor BUD31
e5yzgo1	o:2-163	Single-stranded right-handed beta-helix	Leucine-rich repeats	Leucine-rich repeats
e5yzgO3	O:19-89	RING/U-box-like	RING/U-box-like	FYVE/PHD zinc finger
e5yzgO1	O:90-220	CCCH zinc finger	CCCH zinc finger	CCCH zinc finger
e5yzgO2	O:221-303	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e5yzgp1	p:3-96	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e5yzgQ3	Q:19-415	Repetitive alpha hairpins	ARM repeat	ARM repeat
e5yzgQ5	Q:416-492,Q:660-706,Q:795-1134	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5yzgQ4	Q:493-659	cradle loop barrel	RIFT-related	Alanine racemase-C
e5yzgQ2	Q:707-753,Q:773-794	Spliceosomal helicase Aquarius insert domain	Spliceosomal helicase Aquarius insert domain	Spliceosomal helicase Aquarius insert domain
e5yzgQ1	Q:1135-1381	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5yzgs1	s:68-134,s:195-504	beta-propeller-like	beta-propeller	7-bladed
e5yzgS1	S:8-166	Cyclophilin-like	Cyclophilin-like	Cyclophilin-like
e5yzgT1	T:184-496	beta-propeller-like	beta-propeller	7-bladed
e5yzgu1	u:22-242	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5yzgu2	u:243-411	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5yzgv1	v:5-148	Mago nashi protein	Mago nashi protein	Mago nashi protein
e5yzgV2	V:149-406	Repetitive alpha hairpins	ARM repeat	ARM repeat
e5yzgV1	V:448-648	Repetitive alpha hairpins	ARM repeat	ARM repeat
e5yzgw1	w:64-154	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e5yzgZ4	Z:471-707,Z:879-913	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5yzgZ2	Z:708-878	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5yzgZ3	Z:914-1061	Sec63 N-terminal subdomain-like	Sec63 N-terminal subdomain-like	Sec63 N-terminal subdomain-like
e5yzgZ1	Z:1062-1152	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins