ECOD: domain e5zwmx1

Domain ID e5zwmx1

A: beta barrels
X: SH3
H: SH3
T: SH3
F: LSM

UID:	002391576
Type:	Automatic domain
Parent:	e1b34A1
Range:	x:11-84
PDB:	5zwm
PDB Description:	U6 snRNA-associated Sm-like protein LSm6
UniProt:	Q06406
Hsap BLAST neighbor:	P62312
Species:

Domains in the same chain:

Download Pymol

e5zwmx1	x:11-84	SH3	SH3	SH3

Domains in the same PDB:

e5zwm11	1:156-971	Repetitive alpha hairpins	ARM repeat	ARM repeat
e5zwm33	3:56-299,3:324-451,3:472-483	beta-propeller-like	beta-propeller	7-bladed
e5zwm34	3:452-784,3:815-851	beta-propeller-like	beta-propeller	7-bladed
e5zwm31	3:852-890,3:918-1231	beta-propeller-like	beta-propeller	7-bladed
e5zwm32	3:1232-1261,3:1298-1361	HTH	HTH	tri-helical
e5zwm41	4:9-86	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e5zwm42	4:106-203	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e5zwm53	5:2-18,5:42-54,5:82-104	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5zwm52	5:21-27,5:55-70	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5zwm51	5:28-43,5:71-83	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5zwm61	6:1-84	RDS3 complex subunit 10	RDS3 complex subunit 10	RDS3 complex subunit 10
e5zwma1	a:8-53,a:77-103	SH3	SH3	SH3
e5zwmA6	A:131-883	Pre-mRNA-splicing factor 8 N-terminal domain	Pre-mRNA-splicing factor 8 N-terminal domain	Pre-mRNA-splicing factor 8 N-terminal domain
e5zwmA2	A:884-1255	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e5zwmA1	A:1256-1574	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases
e5zwmA3	A:1575-1828	Restriction endonuclease-like	Restriction endonuclease-like	Restriction endonuclease-like
e5zwmA4	A:1829-2085	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e5zwmA5	A:2150-2401	Cytidine deaminase-like	Cytidine deaminase-like	Cytidine deaminase-like
e5zwmb1	b:1-47,b:71-109	SH3	SH3	SH3
e5zwmc1	c:20-110	SH3	SH3	SH3
e5zwmC5	C:102-463	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5zwmC3	C:464-510,C:530-587	cradle loop barrel	RIFT-related	Alanine racemase-C
e5zwmC2	C:588-674	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e5zwmC1	C:675-858	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e5zwmC4	C:859-975	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e5zwmd1	d:5-83	SH3	SH3	SH3
e5zwmD10	D:447-700	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5zwmD6	D:701-905	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5zwmD5	D:906-1010	HTH	HTH	winged
e5zwmD4	D:1011-1142	Sec63 N-terminal subdomain-like	Sec63 N-terminal subdomain-like	Sec63 N-terminal subdomain-like
e5zwmD11	D:1143-1198	HhH/H2TH	SAM-like subdomain in Sec63-like proteins	SAM-like subdomain in Sec63-like proteins
e5zwmD7	D:1199-1333	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e5zwmD8	D:1334-1541	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5zwmD9	D:1542-1740	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5zwmD1	D:1741-1858	HTH	HTH	winged
e5zwmD3	D:1859-1991	Sec63 N-terminal subdomain-like	Sec63 N-terminal subdomain-like	Sec63 N-terminal subdomain-like
e5zwmD2	D:1992-2049	HhH/H2TH	SAM-like subdomain in Sec63-like proteins	SAM-like subdomain in Sec63-like proteins
e5zwmD12	D:2050-2163	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e5zwme1	e:10-93	SH3	SH3	SH3
e5zwmE1	E:3-141	Thioredoxin-like	Thioredoxin-like	Thioredoxin-like
e5zwmf1	f:11-83	SH3	SH3	SH3
e5zwmg1	g:1-76	SH3	SH3	SH3
e5zwmh1	h:6-55,h:75-102	SH3	SH3	SH3
e5zwmi1	i:10-92	SH3	SH3	SH3
e5zwmj1	j:12-83	SH3	SH3	SH3
e5zwmk1	k:2-76	SH3	SH3	SH3
e5zwml1	l:4-84	SH3	SH3	SH3
e5zwmL2	L:39-224	Nop N-terminal domain	Nop N-terminal domain	Nop N-terminal domain
e5zwmL1	L:225-348	HhH/H2TH	SAM/DNA-glycosylase	Nop C-terminal domain
e5zwmL3	L:349-462	Pre-mRNA-processing factor 31 C-terminal region	Pre-mRNA-processing factor 31 C-terminal region	Pre-mRNA-processing factor 31 C-terminal region
e5zwmm1	m:1-48,m:76-109	SH3	SH3	SH3
e5zwmM1	M:1-126	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5zwmn1	n:44-108	SH3	SH3	SH3
e5zwmo1	o:1-162	Single-stranded right-handed beta-helix	Leucine-rich repeats	Leucine-rich repeats
e5zwmp1	p:29-103	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e5zwmP1	P:12-54,P:76-102	SH3	SH3	SH3
e5zwmq1	q:1-92	SH3	SH3	SH3
e5zwmQ1	Q:1-48,Q:78-146	SH3	SH3	SH3
e5zwmr1	r:3-79	SH3	SH3	SH3
e5zwmR1	R:17-108	SH3	SH3	SH3
e5zwms1	s:1-88	SH3	SH3	SH3
e5zwmS1	S:4-85	SH3	SH3	SH3
e5zwmt1	t:4-85	SH3	SH3	SH3
e5zwmT1	T:10-93	SH3	SH3	SH3
e5zwmU1	U:12-84	SH3	SH3	SH3
e5zwmv1	v:34-105	beta-beta-alpha zinc fingers	beta-beta-alpha zinc fingers	beta-beta-alpha zinc fingers
e5zwmv2	v:149-253	HSP20-like	Pre-mRNA-splicing factor PRP11 C-terminal domain	Pre-mRNA-splicing factor PRP11 C-terminal domain
e5zwmV1	V:2-76	SH3	SH3	SH3
e5zwmw1	w:89-228	Surp module (SWAP domain)	Surp module (SWAP domain)	Surp module (SWAP domain)
e5zwmx1	x:11-84	SH3	SH3	SH3
e5zwmX1	X:2-129	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e5zwmy1	y:26-105	SH3	SH3	SH3
e5zwmz1	z:3-67	SH3	SH3	SH3