ECOD: domain e5zwoA5

Domain ID e5zwoA5

A: alpha bundles
X: helical bundle domain in reverse transcriptase-like polymerases
H: helical bundle domain in reverse transcriptase-like polymerases
T: helical bundle domain in reverse transcriptase-like polymerases
F: U6-snRNA_bdg,U5_2-snRNA_bdg

UID:	002409134
Type:	Automatic domain
Parent:	e3zefE2
Range:	A:1256-1574
PDB:	5zwo
PDB Description:	Pre-mRNA-splicing factor 8
UniProt:	P33334
Hsap BLAST neighbor:	Q6P2Q9
Species:

Domains in the same chain:

Download Pymol

e5zwoA4	A:131-431,A:455-883	Pre-mRNA-splicing factor 8 N-terminal domain	Pre-mRNA-splicing factor 8 N-terminal domain	Pre-mRNA-splicing factor 8 N-terminal domain
e5zwoA6	A:884-1255	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e5zwoA5	A:1256-1574	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases
e5zwoA1	A:1575-1828	Restriction endonuclease-like	Restriction endonuclease-like	Restriction endonuclease-like
e5zwoA3	A:1829-2085	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e5zwoA2	A:2150-2401	Cytidine deaminase-like	Cytidine deaminase-like	Cytidine deaminase-like

Domains in the same PDB:

e5zwo01	0:9-209	Repetitive alpha hairpins	Pre-mRNA-splicing factor 38A	Pre-mRNA-splicing factor 38A
e5zwo11	1:156-971	Repetitive alpha hairpins	ARM repeat	ARM repeat
e5zwo32	3:56-299,3:324-451,3:472-483	beta-propeller-like	beta-propeller	7-bladed
e5zwo31	3:452-784,3:815-851	beta-propeller-like	beta-propeller	7-bladed
e5zwo33	3:852-890,3:918-1231	beta-propeller-like	beta-propeller	7-bladed
e5zwo34	3:1232-1261,3:1298-1361	HTH	HTH	tri-helical
e5zwo42	4:8-86	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e5zwo41	4:106-203	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e5zwo53	5:2-18,5:42-54,5:82-104	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5zwo52	5:21-27,5:55-70	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5zwo51	5:28-43,5:71-83	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5zwo61	6:1-84	RDS3 complex subunit 10	RDS3 complex subunit 10	RDS3 complex subunit 10
e5zwoa1	a:8-53,a:77-103	SH3	SH3	SH3
e5zwoA4	A:131-431,A:455-883	Pre-mRNA-splicing factor 8 N-terminal domain	Pre-mRNA-splicing factor 8 N-terminal domain	Pre-mRNA-splicing factor 8 N-terminal domain
e5zwoA6	A:884-1255	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e5zwoA5	A:1256-1574	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases
e5zwoA1	A:1575-1828	Restriction endonuclease-like	Restriction endonuclease-like	Restriction endonuclease-like
e5zwoA3	A:1829-2085	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e5zwoA2	A:2150-2401	Cytidine deaminase-like	Cytidine deaminase-like	Cytidine deaminase-like
e5zwob1	b:1-47,b:71-109	SH3	SH3	SH3
e5zwoc1	c:20-110	SH3	SH3	SH3
e5zwoC4	C:102-456	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5zwoC2	C:457-510,C:530-587	cradle loop barrel	RIFT-related	Alanine racemase-C
e5zwoC1	C:588-676	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e5zwoC5	C:677-857	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e5zwoC3	C:858-975	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e5zwod1	d:5-83	SH3	SH3	SH3
e5zwoD9	D:447-700	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5zwoD4	D:701-905	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5zwoD11	D:906-1010	HTH	HTH	winged
e5zwoD3	D:1011-1142	Sec63 N-terminal subdomain-like	Sec63 N-terminal subdomain-like	Sec63 N-terminal subdomain-like
e5zwoD12	D:1143-1198	HhH/H2TH	SAM-like subdomain in Sec63-like proteins	SAM-like subdomain in Sec63-like proteins
e5zwoD6	D:1199-1333	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e5zwoD1	D:1334-1541	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5zwoD7	D:1542-1740	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5zwoD5	D:1741-1858	HTH	HTH	winged
e5zwoD8	D:1859-1991	Sec63 N-terminal subdomain-like	Sec63 N-terminal subdomain-like	Sec63 N-terminal subdomain-like
e5zwoD10	D:1992-2049	HhH/H2TH	SAM-like subdomain in Sec63-like proteins	SAM-like subdomain in Sec63-like proteins
e5zwoD2	D:2050-2163	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e5zwoe1	e:10-93	SH3	SH3	SH3
e5zwoE1	E:3-140	Thioredoxin-like	Thioredoxin-like	Thioredoxin-like
e5zwof1	f:11-83	SH3	SH3	SH3
e5zwog1	g:1-76	SH3	SH3	SH3
e5zwoh1	h:6-53,h:77-102	SH3	SH3	SH3
e5zwoi1	i:10-92	SH3	SH3	SH3
e5zwoj1	j:12-83	SH3	SH3	SH3
e5zwok1	k:2-76	SH3	SH3	SH3
e5zwol1	l:4-84	SH3	SH3	SH3
e5zwoL3	L:39-224	Nop N-terminal domain	Nop N-terminal domain	Nop N-terminal domain
e5zwoL1	L:225-348	HhH/H2TH	SAM/DNA-glycosylase	Nop C-terminal domain
e5zwoL2	L:349-462	Pre-mRNA-processing factor 31 C-terminal region	Pre-mRNA-processing factor 31 C-terminal region	Pre-mRNA-processing factor 31 C-terminal region
e5zwom1	m:1-48,m:76-109	SH3	SH3	SH3
e5zwoM1	M:1-126	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5zwon1	n:44-108	SH3	SH3	SH3
e5zwoo1	o:1-162	Single-stranded right-handed beta-helix	Leucine-rich repeats	Leucine-rich repeats
e5zwop1	p:29-103	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e5zwoP1	P:12-54,P:76-102	SH3	SH3	SH3
e5zwoq1	q:1-92	SH3	SH3	SH3
e5zwoQ1	Q:1-48,Q:78-146	SH3	SH3	SH3
e5zwor1	r:3-79	SH3	SH3	SH3
e5zwoR1	R:17-108	SH3	SH3	SH3
e5zwos1	s:1-88	SH3	SH3	SH3
e5zwoS1	S:4-85	SH3	SH3	SH3
e5zwot1	t:4-85	SH3	SH3	SH3
e5zwoT1	T:10-93	SH3	SH3	SH3
e5zwoU1	U:12-84	SH3	SH3	SH3
e5zwov2	v:34-105	beta-beta-alpha zinc fingers	beta-beta-alpha zinc fingers	beta-beta-alpha zinc fingers
e5zwov1	v:149-253	HSP20-like	Pre-mRNA-splicing factor PRP11 C-terminal domain	Pre-mRNA-splicing factor PRP11 C-terminal domain
e5zwoV1	V:2-76	SH3	SH3	SH3
e5zwow1	w:89-228	Surp module (SWAP domain)	Surp module (SWAP domain)	Surp module (SWAP domain)
e5zwox1	x:11-84	SH3	SH3	SH3
e5zwoX1	X:2-129	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e5zwoy1	y:26-105	SH3	SH3	SH3
e5zwoz1	z:3-67	SH3	SH3	SH3