Domain ID e6a5oE2

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  • A: a+b two layers
  • X: RPB5-like RNA polymerase subunit
  • H: RPB5-like RNA polymerase subunit
  • T: RPB5-like RNA polymerase subunit
  • F: RNA_pol_Rpb5_C
UID: 002394812
Type: Automatic domain
Parent: e1dzfA1
Range: E:143-214
PDB: 6a5o
PDB Description: RNA polymerase subunit ABC27, common to RNA polymerases I, II, and III
UniProt: C4R3P8
Hsap BLAST neighbor: P19388
Species:

Structure of domain e6a5oE2

Domains in the same chain:

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e6a5oE1 E:2-142 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e6a5oE2 E:143-214 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit

Domains in the same PDB:

e6a5oa1 a:38-134 Histone-like Histone-related Histone
e6a5oA9 A:2-337 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e6a5oA3 A:338-375,A:437-520 cradle loop barrel RIFT-related double psi
e6a5oA8 A:376-436 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6a5oA5 A:521-663 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e6a5oA1 A:664-872 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e6a5oA7 A:873-1061 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e6a5oA4 A:1062-1104,A:1304-1457 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e6a5oA2 A:1105-1133,A:1245-1303 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6a5oA6 A:1134-1244 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6a5ob1 b:23-102 Histone-like Histone-related Histone
e6a5oB1 B:9-57,B:77-121,B:155-209,B:398-534 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6a5oB7 B:210-397 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e6a5oB5 B:535-623 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e6a5oB6 B:624-655,B:675-813 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e6a5oB2 B:814-850,B:975-1097 cradle loop barrel RIFT-related double psi
e6a5oB4 B:851-974 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6a5oB3 B:1098-1222 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6a5oc1 c:16-118 Histone-like Histone-related Histone
e6a5oC2 C:4-40,C:173-266 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6a5oC1 C:41-172 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e6a5od1 d:28-122 Histone-like Histone-related Histone
e6a5oD1 D:3-185 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e6a5oe1 e:39-135 Histone-like Histone-related Histone
e6a5oE1 E:2-142 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e6a5oE2 E:143-214 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e6a5of1 f:25-102 Histone-like Histone-related Histone
e6a5oF1 F:71-154 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e6a5og1 g:14-118 Histone-like Histone-related Histone
e6a5oG1 G:1-68 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e6a5oG2 G:69-171 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6a5oh1 h:29-121 Histone-like Histone-related Histone
e6a5oH1 H:3-145 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6a5oI2 I:3-49 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6a5oI1 I:50-113 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6a5oJ1 J:1-66 HTH RPB10 RPB10
e6a5oK1 K:1-113 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6a5oL1 L:28-72 Rubredoxin-like Rubredoxin-related Rubredoxin-related