ECOD: domain e6b6hC9

Domain ID e6b6hC9

A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: double psi
F: RNA_pol_Rpb2_6

UID:	002137307
Type:	Automatic domain
Parent:	e4s20C1
Range:	C:791-828,C:1058-1237
PDB:	6b6h
PDB Description:	DNA-directed RNA polymerase subunit beta
UniProt:	B7MIX3
Hsap BLAST neighbor:	Q9H9Y6
Species:

Domains in the same chain:

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e6b6hC1	C:3-152,C:450-577	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6b6hC8	C:153-226,C:343-451	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase
e6b6hC4	C:227-234,C:289-342	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6b6hC5	C:235-288	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6b6hC6	C:578-714	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase
e6b6hC7	C:713-790	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6b6hC9	C:791-828,C:1058-1237	cradle loop barrel	RIFT-related	double psi
e6b6hC10	C:828-938	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6b6hC2	C:939-1057	Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit	Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit	Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit
e6b6hC3	C:1238-1342	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase

Domains in the same PDB:

e6b6hA1	A:6-52,A:174-235	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e6b6hA2	A:53-173	Ribosomal protein TL5/L25 C-terminal domain-like	Insert subdomain of RNA polymerase alpha subunit	Insert subdomain of RNA polymerase alpha subunit
e6b6hB1	B:6-52,B:174-233	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e6b6hB2	B:53-173	Ribosomal protein TL5/L25 C-terminal domain-like	Insert subdomain of RNA polymerase alpha subunit	Insert subdomain of RNA polymerase alpha subunit
e6b6hC1	C:3-152,C:450-577	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6b6hC8	C:153-226,C:343-451	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase
e6b6hC4	C:227-234,C:289-342	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6b6hC5	C:235-288	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6b6hC6	C:578-714	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase
e6b6hC7	C:713-790	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6b6hC9	C:791-828,C:1058-1237	cradle loop barrel	RIFT-related	double psi
e6b6hC10	C:828-938	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6b6hC2	C:939-1057	Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit	Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit	Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit
e6b6hC3	C:1238-1342	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6b6hD3	D:15-341	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit
e6b6hD8	D:334-498	cradle loop barrel	RIFT-related	double psi
e6b6hD2	D:499-638	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit
e6b6hD5	D:639-810	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit
e6b6hD9	D:811-894	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6b6hD7	D:895-931,D:1214-1376	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit
e6b6hD1	D:932-1022	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6b6hD4	D:1023-1131	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6b6hD6	D:1134-1215	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6b6hE1	E:2-80	RPB6/omega subunit-like	RPB6/omega subunit-like	RNA polymerase omega subunit
e6b6hF3	F:79-171,F:210-447	Sigma2 domain-like	Sigma2 domain of RNA polymerase sigma factors	Sigma2 domain of RNA polymerase sigma factors
e6b6hF2	F:448-479	HTH	HTH	tri-helical
e6b6hF1	F:480-613	HTH	HTH	tri-helical
e6b6hG1	G:9-137	jelly-roll	Double-stranded beta-helix	Double-stranded beta-helix
e6b6hG2	G:138-209	HTH	HTH	winged
e6b6hH2	H:9-137	jelly-roll	Double-stranded beta-helix	Double-stranded beta-helix
e6b6hH1	H:138-209	HTH	HTH	winged
e6b6hI1	I:250-324	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like