Domain ID e6by1DJ1

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  • A: a/b three-layered sandwiches
  • X: Ribosomal protein L13/L15p/L18e/L32e
  • H: Ribosomal protein L13 and L16-A
  • T: Ribosomal protein L13 and L16-A
  • F: Ribosomal_L13
UID: 002454147
Type: Automatic domain
Parent: e4v19N1
Range: DJ:1-142
Ligands: MG
PDB: 6by1
PDB Description: 50S ribosomal protein L13
UniProt: P0AA10
Hsap BLAST neighbor: Q9BYD1
Species:

Structure of domain e6by1DJ1

Domains in the same chain:

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e6by1DJ1 DJ:1-142 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A

Domains in the same PDB:

e6by1AB1 AB:1-225 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e6by1AC1 AC:106-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e6by1AC2 AC:2-105 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e6by1AD1 AD:1-205 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e6by1AE2 AE:78-158 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6by1AE1 AE:9-77 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e6by1AF1 AF:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e6by1AG1 AG:1-151 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e6by1AH2 AH:66-128 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e6by1AH1 AH:1-65 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e6by1AI1 AI:3-126 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6by1AJ1 AJ:5-102 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e6by1AK1 AK:12-127 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e6by1AL1 AL:1-123 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6by1AM1 AM:1-114 HhH/H2TH H2TH H2TH
e6by1AN1 AN:1-101 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e6by1AO1 AO:1-88 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e6by1AP1 AP:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e6by1AQ1 AQ:3-82 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6by1AR1 AR:19-73 HTH HTH tri-helical
e6by1AS1 AS:2-80 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e6by1AT1 AT:2-86 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e6by1BB1 BB:1-225 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e6by1BC1 BC:106-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e6by1BC2 BC:2-105 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e6by1BD1 BD:1-205 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e6by1BE2 BE:78-158 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6by1BE1 BE:9-77 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e6by1BF1 BF:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e6by1BG1 BG:1-71,BG:91-151 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e6by1BH2 BH:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e6by1BH1 BH:67-129 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e6by1BI1 BI:3-129 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6by1BJ1 BJ:5-102 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e6by1BK1 BK:12-128 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e6by1BL1 BL:1-123 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6by1BM1 BM:1-114 HhH/H2TH H2TH H2TH
e6by1BN1 BN:1-101 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e6by1BO1 BO:1-88 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e6by1BP1 BP:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e6by1BQ1 BQ:3-82 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6by1BR1 BR:19-73 HTH HTH tri-helical
e6by1BS1 BS:2-80 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e6by1BT1 BT:2-86 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e6by1C01 C0:10-48 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e6by1C11 C1:1-56 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6by1C21 C2:3-52 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6by1C31 C3:1-46 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e6by1C41 C4:1-61 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e6by1C51 C5:2-110 Alpha-beta plaits Ribosomal protein L10-like Ribosomal protein L10-like
e6by1C61 C6:1-38 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e6by1CC2 CC:125-271 SH3 SH3 SH3
e6by1CC1 CC:1-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6by1CD1 CD:1-209 cradle loop barrel RIFT-related Alanine racemase-C
e6by1CE1 CE:21-201 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e6by1CF1 CF:1-177 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e6by1CG1 CG:82-176 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e6by1CG2 CG:1-81 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e6by1CH1 CH:1-55 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e6by1CH2 CH:55-149 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e6by1CI1 CI:71-141 HTH HTH Ribosomal protein L11, C-terminal domain
e6by1CJ1 CJ:1-142 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e6by1CK1 CK:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e6by1CL1 CL:2-144 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e6by1CM1 CM:1-135 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e6by1CN1 CN:1-121 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e6by1CO1 CO:2-117 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e6by1CP1 CP:1-114 SH3 SH3 SH3
e6by1CQ1 CQ:1-117 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e6by1CR1 CR:1-103 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e6by1CS1 CS:1-110 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e6by1CT1 CT:1-93 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e6by1CU1 CU:1-102 SH3 SH3 SH3
e6by1CV1 CV:1-94 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e6by1CW1 CW:11-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e6by1CX1 CX:1-77 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e6by1CY1 CY:1-61 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e6by1CZ1 CZ:1-58 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e6by1D01 D0:10-48 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e6by1D11 D1:1-56 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6by1D21 D2:3-52 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6by1D31 D3:1-46 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e6by1D41 D4:1-62 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e6by1D61 D6:1-38 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e6by1DC2 DC:125-271 SH3 SH3 SH3
e6by1DC1 DC:1-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6by1DD1 DD:1-209 cradle loop barrel RIFT-related Alanine racemase-C
e6by1DE1 DE:22-201 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e6by1DF1 DF:1-177 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e6by1DG2 DG:1-81 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e6by1DG1 DG:82-176 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e6by1DH2 DH:1-55 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e6by1DH1 DH:56-149 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e6by1DI1 DI:70-141 HTH HTH Ribosomal protein L11, C-terminal domain
e6by1DJ1 DJ:1-142 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e6by1DK1 DK:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e6by1DL1 DL:2-144 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e6by1DM1 DM:1-136 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e6by1DN1 DN:1-121 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e6by1DO1 DO:2-117 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e6by1DP1 DP:1-114 SH3 SH3 SH3
e6by1DQ1 DQ:1-117 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e6by1DR1 DR:1-103 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e6by1DS1 DS:1-110 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e6by1DT1 DT:1-93 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e6by1DU1 DU:1-102 SH3 SH3 SH3
e6by1DV1 DV:1-94 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e6by1DW1 DW:11-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e6by1DX1 DX:1-77 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e6by1DY1 DY:1-63 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e6by1DZ1 DZ:1-58 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e