Domain ID e6cncR6

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  • A: alpha arrays
  • X: HTH
  • H: HTH
  • T: Cyclin-like
  • F: TFIIB
UID: 002397127
Type: Automatic domain
Parent: e1volA1
Range: R:72-175
PDB: 6cnc
PDB Description: Transcription factor IIIB 70 kDa subunit,TATA-box-binding protein,Transcription factor IIIB 70 kDa subunit
UniProt: P29056
Hsap BLAST neighbor: Q92994
Species:

Structure of domain e6cncR6

Domains in the same chain:

Download Pymol

e6cncR1 R:1-41 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6cncR6 R:72-175 HTH HTH Cyclin-like
e6cncR3 R:176-297 HTH HTH Cyclin-like
e6cncR4 R:387-483,R:576-611 TBP-like TATA-box binding protein-like TATA-box binding protein-like
e6cncR5 R:483-566 TBP-like TATA-box binding protein-like TATA-box binding protein-like
e6cncR2 R:612-650 TBP-like TATA-box binding protein-like TATA-box binding protein-like

Domains in the same PDB:

e6cncA7 A:2-358 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e6cncA3 A:359-402,A:466-551 cradle loop barrel RIFT-related double psi
e6cncA2 A:403-465 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6cncA4 A:552-710 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e6cncA6 A:711-919 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e6cncA5 A:920-1084 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e6cncA1 A:1085-1136,A:1318-1460 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e6cncA9 A:1137-1164,A:1272-1317 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6cncA8 A:1165-1271 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6cncB3 B:36-200,B:376-516 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6cncB1 B:201-375 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e6cncB5 B:517-605 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e6cncB2 B:606-745 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e6cncB7 B:746-782,B:907-1029 cradle loop barrel RIFT-related double psi
e6cncB6 B:783-906 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6cncB4 B:1030-1149 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6cncC1 C:1-75,C:222-335 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6cncC2 C:76-221 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e6cncD1 D:1-71,D:98-161 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e6cncE1 E:1-143 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e6cncE2 E:144-215 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e6cncF1 F:71-153 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e6cncG1 G:2-78 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e6cncG2 G:79-166,G:189-212 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6cncH1 H:1-146 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6cncI1 I:1-42 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6cncJ1 J:1-67 HTH RPB10 RPB10
e6cncK1 K:42-142 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6cncL1 L:25-70 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6cncM1 M:71-196,M:225-262 triple barrel triple barrel Rap30/74 interaction domains-like
e6cncN1 N:274-320,N:360-422 triple barrel triple barrel Rap30/74 interaction domains-like
e6cncO5 O:31-129 HTH HTH winged
e6cncO1 O:130-282 HTH HTH winged
e6cncO2 O:283-371,O:449-479 HTH HTH winged
e6cncO3 O:480-567 HTH HTH winged
e6cncO4 O:568-654 Long alpha-hairpin RPC62 helical hairpin domain RPC62 helical hairpin domain
e6cncP3 P:10-77 HTH HTH winged
e6cncP2 P:78-165 HTH HTH winged
e6cncP1 P:166-271,P:292-316 HTH HTH winged
e6cncR1 R:1-41 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6cncR6 R:72-175 HTH HTH Cyclin-like
e6cncR3 R:176-297 HTH HTH Cyclin-like
e6cncR4 R:387-483,R:576-611 TBP-like TATA-box binding protein-like TATA-box binding protein-like
e6cncR5 R:483-566 TBP-like TATA-box binding protein-like TATA-box binding protein-like
e6cncR2 R:612-650 TBP-like TATA-box binding protein-like TATA-box binding protein-like