Domain ID e6cndC1

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  • A: a+b complex topology
  • X: Ribosomal protein TL5/L25 C-terminal domain-like
  • H: Insert subdomain of RNA polymerase alpha subunit
  • T: Insert subdomain of RNA polymerase alpha subunit
  • F: RNA_pol_A_bac
UID: 002397144
Type: Automatic domain
Parent: e1twfC2
Range: C:76-221
PDB: 6cnd
PDB Description: DNA-directed RNA polymerases I and III subunit RPAC1
UniProt: P07703
Hsap BLAST neighbor: O15160
Species:

Structure of domain e6cndC1

Domains in the same chain:

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e6cndC2 C:1-75,C:222-335 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6cndC1 C:76-221 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit

Domains in the same PDB:

e6cndA3 A:2-358 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e6cndA5 A:359-402,A:466-551 cradle loop barrel RIFT-related double psi
e6cndA2 A:403-465 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6cndA1 A:552-710 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e6cndA9 A:711-919 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e6cndA6 A:920-1084 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e6cndA8 A:1085-1136,A:1318-1460 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e6cndA4 A:1137-1164,A:1272-1317 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6cndA7 A:1165-1271 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6cndB5 B:36-200,B:376-516 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6cndB4 B:201-375 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e6cndB6 B:517-605 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e6cndB2 B:606-745 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e6cndB1 B:746-782,B:907-1029 cradle loop barrel RIFT-related double psi
e6cndB7 B:783-906 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6cndB3 B:1030-1149 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6cndC2 C:1-75,C:222-335 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6cndC1 C:76-221 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e6cndD1 D:1-71,D:98-161 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e6cndE1 E:1-143 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e6cndE2 E:144-215 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e6cndF1 F:71-153 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e6cndG1 G:2-78 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e6cndG2 G:79-166,G:189-212 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6cndH1 H:1-146 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6cndI1 I:1-42 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6cndJ1 J:1-67 HTH RPB10 RPB10
e6cndK1 K:42-142 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6cndL1 L:25-70 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6cndM1 M:71-196,M:225-262 triple barrel triple barrel Rap30/74 interaction domains-like
e6cndN1 N:274-320,N:360-422 triple barrel triple barrel Rap30/74 interaction domains-like
e6cndO4 O:31-129 HTH HTH winged
e6cndO3 O:130-282 HTH HTH winged
e6cndO5 O:283-371,O:449-479 HTH HTH winged
e6cndO1 O:480-567 HTH HTH winged
e6cndO2 O:568-654 Long alpha-hairpin RPC62 helical hairpin domain RPC62 helical hairpin domain
e6cndP1 P:10-77 HTH HTH winged
e6cndP2 P:78-165 HTH HTH winged
e6cndP3 P:166-271,P:292-316 HTH HTH winged
e6cndR2 R:1-41 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6cndR1 R:72-175 HTH HTH Cyclin-like
e6cndR4 R:176-297 HTH HTH Cyclin-like
e6cndR3 R:387-483,R:576-611 TBP-like TATA-box binding protein-like TATA-box binding protein-like
e6cndR5 R:483-566 TBP-like TATA-box binding protein-like TATA-box binding protein-like
e6cndR6 R:612-650 TBP-like TATA-box binding protein-like TATA-box binding protein-like