Domain ID e6d9jDD1

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  • A: a+b two layers
  • X: dsRBD-like
  • H: dsRNA-binding domain-like
  • T: dsRNA-binding domain-like
  • F: Ribosomal_S5
UID: 002331852
Type: Automatic domain
Parent: e4v6iAE2
Range: DD:135-201
PDB: 6d9j
PDB Description: uS5
Hsap BLAST neighbor: P15880
Species: Oryctolagus cuniculus

Structure of domain e6d9jDD1

Domains in the same chain:

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e6d9jDD3 DD:202-278 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6d9jDD2 DD:58-134 N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p)
e6d9jDD1 DD:135-201 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like

Domains in the same PDB:

e6d9j91 9:3-359 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6d9j93 9:360-497 cradle loop barrel RIFT-related Alanine racemase-C
e6d9j94 9:498-576 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e6d9j92 9:577-741 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6d9j95 9:742-858 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e6d9ja1 a:2-148 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e6d9jA1 A:11-96 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6d9jA2 A:97-249 SH3 SH3 SH3
e6d9jaa1 aa:41-115 HTH HTH winged
e6d9jb1 b:2-117 RPL29 RPL29 RPL29
e6d9jB1 B:2-395 cradle loop barrel RIFT-related Alanine racemase-C
e6d9jbb1 bb:2-102 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e6d9jBB1 BB:2-218 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e6d9jc1 c:10-107 Bacillus chorismate mutase-like L30e-like L30e-like
e6d9jC1 C:2-273 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e6d9jC2 C:274-363 C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p)
e6d9jcc1 cc:2-84 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6d9jCC2 CC:114-233 T-fold 40S ribosomal protein S3A C-terminal domain 40S ribosomal protein S3A C-terminal domain
e6d9jCC1 CC:21-113 Ribosomal protein L25-like 40S ribosomal protein S3A N-terminal domain 40S ribosomal protein S3A N-terminal domain
e6d9jd1 d:18-124 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e6d9jD1 D:3-295 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e6d9jdd1 dd:7-68 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6d9jDD2 DD:58-134 N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p)
e6d9jDD1 DD:135-201 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e6d9jDD3 DD:202-278 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6d9je1 e:2-129 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e6d9jE1 E:41-291 SH3 SH3 SH3
e6d9jee1 ee:2-56 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e6d9jEE1 EE:92-228 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e6d9jEE2 EE:1-99 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e6d9jf1 f:2-110 cradle loop barrel RIFT-related Alanine racemase-C
e6d9jF1 F:23-247 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e6d9jff1 ff:76-132 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e)
e6d9jFF2 FF:2-116 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e6d9jFF3 FF:117-175 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6d9jFF1 FF:176-263 SH3 SH3 SH3
e6d9jg1 g:2-115 Glucocorticoid receptor-like RPL34 RPL34
e6d9jG1 G:80-319 Bacillus chorismate mutase-like L30e-like L30e-like
e6d9jgg1 gg:83-150 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6d9jGG1 GG:14-204 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e6d9jh1 h:2-123 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e6d9jH1 H:1-87 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e6d9jH2 H:88-190 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e6d9jhh1 hh:2-314 beta-propeller-like beta-propeller 7-bladed
e6d9jHH1 HH:1-237 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e6d9ji1 i:2-103 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e)
e6d9jI1 I:2-214 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e6d9jII1 II:6-107 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e6d9jII2 II:108-194 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e6d9jj1 j:2-87 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6d9jJ1 J:8-107,J:127-177 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e6d9jJJ1 JJ:2-207 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e6d9jk1 k:2-70 SRP9/14-like Signal recognition particle alu RNA binding heterodimer SRP9/14-related Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e6d9jK1 K:6-57,K:154-217 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e6d9jK2 K:58-153 Flavodoxin-like Rossmann-like domain in Ribosomal protein L1 Rossmann-like domain in Ribosomal protein L1
e6d9jKK1 KK:2-186 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e6d9jl1 l:2-51 Ribosomal protein L39e Ribosomal protein L39e Ribosomal protein L39e
e6d9jL1 L:2-211 RPL13 RPL13 RPL13
e6d9jLL1 LL:1-96 HTH HTH winged
e6d9jm1 m:51-102 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6d9jM1 M:2-139 SH3 SH3 SH3
e6d9jMM1 MM:3-153 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6d9jn1 n:1-25 Ribosomal protein L41-A Ribosomal protein L41-A Ribosomal protein L41-A
e6d9jN1 N:2-183 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e6d9jNN1 NN:14-130 Bacillus chorismate mutase-like L30e-like L30e-like
e6d9jo1 o:2-105 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6d9jO1 O:5-203 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e6d9jOO2 OO:2-82 HTH 40S ribosomal protein S13 N-terminal domain 40S ribosomal protein S13 N-terminal domain
e6d9jOO1 OO:83-150 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e6d9jp1 p:2-92 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6d9jP1 P:2-154 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e6d9jPP1 PP:16-151 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e6d9jQ1 Q:2-188 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e6d9jQQ1 QQ:12-126 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e6d9jr1 r:2-125 RPL28 RPL28 RPL28
e6d9jR1 R:2-56 Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain
e6d9jR2 R:57-181 Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain
e6d9jRR1 RR:5-146 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6d9js1 s:5-109,s:183-200 Alpha-beta plaits Ribosomal protein L10-like Ribosomal protein L10-like
e6d9js2 s:110-182 Insertion domain in 60S ribosomal protein rpP0 (L10P) Insertion domain in 60S ribosomal protein rpP0 (L10P) Insertion domain in 60S ribosomal protein rpP0 (L10P)
e6d9jS1 S:1-72 GP2-like RplX-like RplX-like
e6d9jS2 S:73-176 GP2-like RplX-like RplX-like
e6d9jSS1 SS:2-133 HTH HTH FF domain
e6d9jt2 t:9-73 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e6d9jt1 t:74-161 HTH HTH Ribosomal protein L11, C-terminal domain
e6d9jT1 T:2-160 SH3 SH3 SH3
e6d9jTT1 TT:2-145 HhH/H2TH H2TH H2TH
e6d9jU1 U:17-115 Ribosomal protein L22e Ribosomal protein L22e Ribosomal protein L22e
e6d9jUU1 UU:3-143 HTH HTH winged
e6d9jV1 V:12-140 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e6d9jVV1 VV:18-117 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e6d9jW1 W:1-121 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e6d9jWW1 WW:1-83 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e)
e6d9jX1 X:39-156 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e6d9jXX1 XX:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e6d9jXX2 XX:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e6d9jY1 Y:1-134 SH3 SH3 SH3
e6d9jYY1 YY:2-142 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6d9jZ1 Z:2-136 SH3 SH3 SH3
e6d9jZZ1 ZZ:4-127 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e