Domain ID e6em5p1

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  • A: beta duplicates or obligate multimers
  • X: beta-propeller-like
  • H: beta-propeller
  • T: 7-bladed
  • F: WD40
UID: 002141584
Type: Automatic domain
Parent: e1k8kC1
Range: p:94-174,p:197-244,p:275-453
PDB: 6em5
PDB Description: Ribosome biogenesis protein YTM1
UniProt: Q12024
Hsap BLAST neighbor: Q9GZL7
Species:

Structure of domain e6em5p1

Domains in the same chain:

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e6em5p1 p:94-174,p:197-244,p:275-453 beta-propeller-like beta-propeller 7-bladed

Domains in the same PDB:

e6em551 5:1-76,5:101-416 beta-propeller-like beta-propeller 8-bladed
e6em5A1 A:28-239 Anticodon-binding domain of Class II aaRS Anticodon-binding domain of Class II aaRS Anticodon-binding domain of Class II aaRS
e6em5B1 B:12-228,B:264-387 cradle loop barrel RIFT-related Alanine racemase-C
e6em5c1 c:9-105 Bacillus chorismate mutase-like L30e-like L30e-like
e6em5C3 C:2-275 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e6em5C2 C:270-360 C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p)
e6em5d1 d:6-112 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e6em5D1 D:267-418 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6em5D2 D:419-481 RNA helicase Hera dimerization domain RNA helicase Hera dimerization domain RNA helicase Hera dimerization domain
e6em5e1 e:4-128 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e6em5E1 E:2-109,E:129-176 SH3 SH3 SH3
e6em5f1 f:2-107 cradle loop barrel RIFT-related Alanine racemase-C
e6em5F1 F:4-244 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e6em5g1 g:2-113 Glucocorticoid receptor-like RPL34 RPL34
e6em5G1 G:50-238 Bacillus chorismate mutase-like L30e-like L30e-like
e6em5h1 h:2-120 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e6em5H2 H:1-85 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e6em5H1 H:86-190 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e6em5i1 i:29-100 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e)
e6em5j1 j:14-86 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6em5k1 k:2-78 SRP9/14-like Signal recognition particle alu RNA binding heterodimer SRP9/14-related Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e6em5K2 K:31-51,K:73-105,K:234-301 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e6em5K1 K:106-233 Flavodoxin-like Rossmann-like domain in Ribosomal protein L1 Rossmann-like domain in Ribosomal protein L1
e6em5l2 l:1-94 Cystatin-like Pre-PUA domain Pre-PUA domain
e6em5l1 l:95-174 cradle loop barrel RIFT-related PUA domain
e6em5L1 L:8-129 RPL13 RPL13 RPL13
e6em5M1 M:3-138 SH3 SH3 SH3
e6em5N1 N:2-204 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e6em5O1 O:3-199 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e6em5p1 p:94-174,p:197-244,p:275-453 beta-propeller-like beta-propeller 7-bladed
e6em5P1 P:10-161 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e6em5q1 q:227-330 Alpha-beta plaits NOL1/NOP2/sun N-terminal ferredoxin-like domain NOL1/NOP2/sun N-terminal ferredoxin-like domain
e6em5q2 q:331-550 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases
e6em5Q1 Q:15-148 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e6em5R2 R:2-56 Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain
e6em5R1 R:57-59,R:89-150 Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain
e6em5S1 S:3-69 GP2-like RplX-like RplX-like
e6em5S2 S:70-172 GP2-like RplX-like RplX-like
e6em5t1 t:12-105,t:127-322 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e6em5U1 U:11-108 Ribosomal protein L22e Ribosomal protein L22e Ribosomal protein L22e
e6em5V1 V:4-137 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e6em5W2 W:3-120,W:212-234 Alpha-beta plaits Ribosomal protein L10-like Ribosomal protein L10-like
e6em5W1 W:121-211 Insertion domain in 60S ribosomal protein rpP0 (L10P) Insertion domain in 60S ribosomal protein rpP0 (L10P) Insertion domain in 60S ribosomal protein rpP0 (L10P)
e6em5X1 X:2-142 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e6em5y1 y:1-225 Pentein Pentein Pentein
e6em5Y1 Y:2-127 SH3 SH3 SH3
e6em5Z1 Z:2-136 SH3 SH3 SH3