ECOD: domain e6eu1J1

Domain ID e6eu1J1

A: alpha arrays
X: HTH
H: RPB10
T: RPB10
F: RNA_pol_N

UID:	002150580
Type:	Automatic domain
Parent:	e1twfJ1
Range:	J:1-67
Ligands:	ZN
PDB:	6eu1
PDB Description:	DNA-directed RNA polymerases I, II, and III subunit RPABC5
UniProt:	P22139
Hsap BLAST neighbor:	P62875
Species:

Domains in the same chain:

Download Pymol

e6eu1J1	J:1-67	HTH	RPB10	RPB10

Domains in the same PDB:

e6eu1A4	A:2-358	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit
e6eu1A3	A:359-402,A:466-551	cradle loop barrel	RIFT-related	double psi
e6eu1A7	A:403-465	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6eu1A5	A:552-710	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit
e6eu1A9	A:711-919	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit
e6eu1A1	A:920-1084	helical domain in yeast RNA-polymerases	third helical domain in yeast RNA-polymerase II beta-prime subunit	third helical domain in yeast RNA-polymerase II beta-prime subunit
e6eu1A2	A:1085-1136,A:1318-1452	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit
e6eu1A6	A:1137-1164,A:1272-1317	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6eu1A8	A:1165-1271	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6eu1B3	B:36-200,B:376-516	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6eu1B4	B:201-375	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase
e6eu1B2	B:517-605	inserted a+b domain in yeast RNA polymerase beta subunit	inserted a+b domain in yeast RNA polymerase beta subunit	inserted a+b domain in yeast RNA polymerase beta subunit
e6eu1B7	B:606-745	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase
e6eu1B6	B:746-782,B:907-1029	cradle loop barrel	RIFT-related	double psi
e6eu1B1	B:783-906	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6eu1B5	B:1030-1149	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6eu1C1	C:1-75,C:222-335	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e6eu1C2	C:76-221	Ribosomal protein TL5/L25 C-terminal domain-like	Insert subdomain of RNA polymerase alpha subunit	Insert subdomain of RNA polymerase alpha subunit
e6eu1D1	D:1-71,D:98-160	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e6eu1E1	E:1-143	Restriction endonuclease-like	Eukaryotic RPB5 N-terminal domain	Eukaryotic RPB5 N-terminal domain
e6eu1E2	E:144-215	RPB5-like RNA polymerase subunit	RPB5-like RNA polymerase subunit	RPB5-like RNA polymerase subunit
e6eu1F1	F:71-153	RPB6/omega subunit-like	RPB6/omega subunit-like	RPB6
e6eu1G1	G:2-78	Dodecin subunit-like	Flavin-binding protein dodecin-like	Flavin-binding protein dodecin-like
e6eu1G2	G:79-212	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6eu1H1	H:1-146	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6eu1I1	I:1-44	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6eu1J1	J:1-67	HTH	RPB10	RPB10
e6eu1K1	K:39-142	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e6eu1L1	L:26-70	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6eu1M1	M:71-196,M:225-266	triple barrel	triple barrel	Rap30/74 interaction domains-like
e6eu1N1	N:274-320,N:360-422	triple barrel	triple barrel	Rap30/74 interaction domains-like
e6eu1O3	O:31-129	HTH	HTH	winged
e6eu1O5	O:130-282	HTH	HTH	winged
e6eu1O2	O:283-371,O:449-479	HTH	HTH	winged
e6eu1O1	O:480-567	HTH	HTH	winged
e6eu1O4	O:568-654	Long alpha-hairpin	RPC62 helical hairpin domain	RPC62 helical hairpin domain
e6eu1P1	P:165-315	HTH	HTH	winged