Domain ID e6eu3E2

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  • A: a/b three-layered sandwiches
  • X: Restriction endonuclease-like
  • H: Eukaryotic RPB5 N-terminal domain
  • T: Eukaryotic RPB5 N-terminal domain
  • F: RNA_pol_Rpb5_N
UID: 002150638
Type: Automatic domain
Parent: e1dzfA2
Range: E:1-143
PDB: 6eu3
PDB Description: DNA-directed RNA polymerases I, II, and III subunit RPABC1
UniProt: P20434
Hsap BLAST neighbor: P19388
Species:

Structure of domain e6eu3E2

Domains in the same chain:

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e6eu3E2 E:1-143 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e6eu3E1 E:144-215 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit

Domains in the same PDB:

e6eu3A4 A:2-329 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e6eu3A3 A:366-402,A:466-551 cradle loop barrel RIFT-related double psi
e6eu3A1 A:403-465 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6eu3A7 A:552-710 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e6eu3A5 A:711-919 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e6eu3A2 A:920-1084 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e6eu3A8 A:1085-1136,A:1318-1460 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e6eu3A9 A:1137-1164,A:1272-1317 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6eu3A6 A:1165-1271 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6eu3B4 B:36-200,B:376-516 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6eu3B1 B:201-375 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e6eu3B5 B:517-605 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e6eu3B6 B:606-745 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e6eu3B7 B:746-782,B:907-1029 cradle loop barrel RIFT-related double psi
e6eu3B2 B:783-906 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6eu3B3 B:1030-1149 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6eu3C2 C:1-75,C:222-335 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6eu3C1 C:76-221 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e6eu3D1 D:1-71,D:98-161 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e6eu3E2 E:1-143 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e6eu3E1 E:144-215 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e6eu3F1 F:71-153 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e6eu3G2 G:2-78 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e6eu3G1 G:79-212 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6eu3H1 H:1-146 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6eu3I1 I:1-42 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6eu3J1 J:1-68 HTH RPB10 RPB10
e6eu3K1 K:42-142 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6eu3L1 L:26-70 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6eu3M1 M:71-196,M:225-262 triple barrel triple barrel Rap30/74 interaction domains-like
e6eu3N1 N:274-315,N:360-422 triple barrel triple barrel Rap30/74 interaction domains-like
e6eu3O4 O:31-129 HTH HTH winged
e6eu3O3 O:130-282 HTH HTH winged
e6eu3O5 O:283-370,O:450-479 HTH HTH winged
e6eu3O1 O:480-567 HTH HTH winged
e6eu3O2 O:568-654 Long alpha-hairpin RPC62 helical hairpin domain RPC62 helical hairpin domain
e6eu3P1 P:171-271,P:294-315 HTH HTH winged