Domain ID e6f42C1

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  • A: a+b two layers
  • X: DCoH-like
  • H: RBP11-like subunits of RNA polymerase
  • T: RBP11-like subunits of RNA polymerase
  • F: RNA_pol_L
UID: 002151119
Type: Automatic domain
Parent: e1bdfA1
Range: C:1-75,C:222-335
PDB: 6f42
PDB Description: DNA-directed RNA polymerases I and III subunit RPAC1
UniProt: P07703
Hsap BLAST neighbor: O15160
Species:

Structure of domain e6f42C1

Domains in the same chain:

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e6f42C1 C:1-75,C:222-335 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6f42C2 C:76-221 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit

Domains in the same PDB:

e6f42A3 A:2-358 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e6f42A1 A:359-402,A:466-551 cradle loop barrel RIFT-related double psi
e6f42A2 A:403-465 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6f42A6 A:552-710 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e6f42A8 A:711-919 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e6f42A4 A:920-1084 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e6f42A7 A:1085-1136,A:1318-1450 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e6f42A9 A:1137-1164,A:1272-1317 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6f42A5 A:1165-1271 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6f42B2 B:36-200,B:376-516 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6f42B7 B:201-375 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e6f42B3 B:517-605 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e6f42B5 B:606-745 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e6f42B4 B:746-782,B:907-1029 cradle loop barrel RIFT-related double psi
e6f42B6 B:783-906 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6f42B1 B:1030-1149 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6f42C1 C:1-75,C:222-335 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6f42C2 C:76-221 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e6f42D1 D:1-71,D:98-161 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e6f42E2 E:2-143 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e6f42E1 E:144-215 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e6f42F1 F:71-153 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e6f42G1 G:2-78 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e6f42G2 G:79-162,G:189-212 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6f42H1 H:1-146 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6f42I1 I:1-34 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6f42J1 J:1-67 HTH RPB10 RPB10
e6f42K1 K:42-142 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6f42L1 L:26-70 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6f42M1 M:71-196,M:230-262 triple barrel triple barrel Rap30/74 interaction domains-like
e6f42N1 N:274-314,N:360-422 triple barrel triple barrel Rap30/74 interaction domains-like
e6f42O5 O:36-129 HTH HTH winged
e6f42O4 O:130-282 HTH HTH winged
e6f42O1 O:283-371,O:449-479 HTH HTH winged
e6f42O2 O:480-567 HTH HTH winged
e6f42O3 O:568-654 Long alpha-hairpin RPC62 helical hairpin domain RPC62 helical hairpin domain
e6f42P1 P:169-189,P:218-271 HTH HTH winged
e6f42U2 U:61-156 TBP-like TATA-box binding protein-like TATA-box binding protein-like
e6f42U1 U:157-240 TBP-like TATA-box binding protein-like TATA-box binding protein-like