ECOD: domain e6fxcBH1

Domain ID e6fxcBH1

A: a/b three-layered sandwiches
X: Ribosomal protein L13/L15p/L18e/L32e
H: Ribosomal protein L13 and L16-A
T: Ribosomal protein L13 and L16-A
F: Ribosomal_L13

UID:	002170056
Type:	Automatic domain
Parent:	e4v19N1
Range:	BH:1-145
PDB:	6fxc
PDB Description:	50S ribosomal protein L13
UniProt:	Q2YYM8
Hsap BLAST neighbor:	Q9BYD1
Species:

Domains in the same chain:

Download Pymol

e6fxcBH1	BH:1-145	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L13 and L16-A	Ribosomal protein L13 and L16-A

Domains in the same PDB:

e6fxcA11	A1:2-48	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6fxcA21	A2:2-44	50S ribosomal protein L34	50S ribosomal protein L34	50S ribosomal protein L34
e6fxcA31	A3:2-65	Ribosomal protein L35p	Ribosomal protein L35p	Ribosomal protein L35p
e6fxcA41	A4:1-37	Ribosomal protein L36	Ribosomal protein L36	Ribosomal protein L36
e6fxcAb1	Ab:1-226	Flavodoxin-like	Ribosomal protein S2/SIS domain	Ribosomal protein S2/SIS domain
e6fxcAc1	Ac:105-203	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e6fxcAc2	Ac:2-104	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e6fxcAC1	AC:2-125	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6fxcAC2	AC:126-275	SH3	SH3	SH3
e6fxcAd1	Ad:3-200	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e6fxcAD1	AD:2-216	cradle loop barrel	RIFT-related	Alanine racemase-C
e6fxcAe2	Ae:10-76	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e6fxcAe1	Ae:77-165	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e6fxcAE1	AE:2-207	Ribosomal protein L4	Ribosomal protein L4	Ribosomal protein L4
e6fxcAf1	Af:1-95	Alpha-beta plaits	Ribosomal protein S6	Ribosomal protein S6
e6fxcAF1	AF:2-176	Ribosomal protein L5	Ribosomal protein L5	Ribosomal protein L5
e6fxcAg1	Ag:1-152	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e6fxcAG2	AG:2-82	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e6fxcAG1	AG:83-176	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e6fxcAh2	Ah:68-132	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e6fxcAh1	Ah:2-67	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e6fxcAH1	AH:1-145	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L13 and L16-A	Ribosomal protein L13 and L16-A
e6fxcAi1	Ai:6-132	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e6fxcAI1	AI:1-122	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e6fxcAj1	Aj:6-102	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e6fxcAJ1	AJ:1-146	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e6fxcAk1	Ak:15-128	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e6fxcAK1	AK:1-137	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal protein L10e
e6fxcAl1	Al:2-136	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6fxcAL1	AL:3-122	Enolase-N/ribosomal protein	Prokaryotic ribosomal protein L17	Prokaryotic ribosomal protein L17
e6fxcAm1	Am:7-110	HhH/H2TH	H2TH	H2TH
e6fxcAM1	AM:1-119	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e6fxcAn1	An:2-61	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e6fxcAN1	AN:2-115	SH3	SH3	SH3
e6fxcAo1	Ao:2-89	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e6fxcAO1	AO:2-117	PABP domain-like	Ribosomal protein L20	Ribosomal protein L20
e6fxcAp1	Ap:2-90	Ribosomal protein S16	Ribosomal protein S16	Ribosomal protein S16
e6fxcAP1	AP:1-102	Ribosomal protein L21p	Ribosomal protein L21p	Ribosomal protein L21p
e6fxcAq1	Aq:5-84	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6fxcAQ1	AQ:1-112	Enolase-N/ribosomal protein	Ribosomal protein L22	Ribosomal protein L22
e6fxcAr1	Ar:24-77	HTH	HTH	tri-helical
e6fxcAR1	AR:2-90	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e6fxcAs1	As:4-83	Ribosomal protein S19	Ribosomal protein S19	Ribosomal protein S19
e6fxcAS1	AS:2-104	SH3	SH3	SH3
e6fxcAt1	At:2-82	Spectrin repeat-like	Ribosomal protein S20	Ribosomal protein S20
e6fxcAT1	AT:2-95	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein L25-like
e6fxcAu1	Au:4-55	30S ribosomal protein S21	30S ribosomal protein S21	30S ribosomal protein S21
e6fxcAU1	AU:12-93	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal L27 protein
e6fxcAv2	Av:131-187	Ribosome-associated factor Y	Ribosome-associated factor Y	Ribosome-associated factor Y
e6fxcAv1	Av:2-106	dsRBD-like	Ribosome binding protein Y (YfiA homologue)	Ribosome binding protein Y (YfiA homologue)
e6fxcAV1	AV:3-60	Ribosomal protein bL28-related	Ribosomal protein bL28-related	Ribosomal protein L28
e6fxcAW1	AW:2-68	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)
e6fxcAX1	AX:2-59	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e
e6fxcAY1	AY:1-59	Ribosomal protein L31p	Ribosomal protein L31p	Ribosomal protein L31p
e6fxcAZ1	AZ:2-49	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6fxcB11	B1:2-48	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6fxcB21	B2:2-44	50S ribosomal protein L34	50S ribosomal protein L34	50S ribosomal protein L34
e6fxcB31	B3:2-65	Ribosomal protein L35p	Ribosomal protein L35p	Ribosomal protein L35p
e6fxcB41	B4:1-37	Ribosomal protein L36	Ribosomal protein L36	Ribosomal protein L36
e6fxcBb1	Bb:1-226	Flavodoxin-like	Ribosomal protein S2/SIS domain	Ribosomal protein S2/SIS domain
e6fxcBc2	Bc:105-203	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e6fxcBc1	Bc:2-104	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e6fxcBC1	BC:126-275	SH3	SH3	SH3
e6fxcBC2	BC:2-125	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6fxcBd1	Bd:3-200	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e6fxcBD1	BD:2-216	cradle loop barrel	RIFT-related	Alanine racemase-C
e6fxcBe1	Be:10-76	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e6fxcBe2	Be:77-165	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e6fxcBE1	BE:2-207	Ribosomal protein L4	Ribosomal protein L4	Ribosomal protein L4
e6fxcBf1	Bf:1-95	Alpha-beta plaits	Ribosomal protein S6	Ribosomal protein S6
e6fxcBF1	BF:2-176	Ribosomal protein L5	Ribosomal protein L5	Ribosomal protein L5
e6fxcBg1	Bg:1-152	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e6fxcBG2	BG:83-176	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e6fxcBG1	BG:2-82	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e6fxcBh2	Bh:68-132	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e6fxcBh1	Bh:2-67	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e6fxcBH1	BH:1-145	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L13 and L16-A	Ribosomal protein L13 and L16-A
e6fxcBi1	Bi:6-132	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e6fxcBI1	BI:1-122	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e6fxcBj1	Bj:6-102	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e6fxcBJ1	BJ:1-146	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e6fxcBk1	Bk:15-128	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e6fxcBK1	BK:1-137	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal protein L10e
e6fxcBl1	Bl:2-136	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6fxcBL1	BL:3-122	Enolase-N/ribosomal protein	Prokaryotic ribosomal protein L17	Prokaryotic ribosomal protein L17
e6fxcBm1	Bm:7-110	HhH/H2TH	H2TH	H2TH
e6fxcBM1	BM:1-119	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e6fxcBn1	Bn:2-61	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e6fxcBN1	BN:2-115	SH3	SH3	SH3
e6fxcBo1	Bo:2-89	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e6fxcBO1	BO:2-117	PABP domain-like	Ribosomal protein L20	Ribosomal protein L20
e6fxcBp1	Bp:2-90	Ribosomal protein S16	Ribosomal protein S16	Ribosomal protein S16
e6fxcBP1	BP:1-102	Ribosomal protein L21p	Ribosomal protein L21p	Ribosomal protein L21p
e6fxcBq1	Bq:5-84	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6fxcBQ1	BQ:1-112	Enolase-N/ribosomal protein	Ribosomal protein L22	Ribosomal protein L22
e6fxcBr1	Br:24-77	HTH	HTH	tri-helical
e6fxcBR1	BR:2-90	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e6fxcBs1	Bs:4-83	Ribosomal protein S19	Ribosomal protein S19	Ribosomal protein S19
e6fxcBS1	BS:2-104	SH3	SH3	SH3
e6fxcBt1	Bt:2-82	Spectrin repeat-like	Ribosomal protein S20	Ribosomal protein S20
e6fxcBT1	BT:2-95	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein L25-like
e6fxcBu1	Bu:4-55	30S ribosomal protein S21	30S ribosomal protein S21	30S ribosomal protein S21
e6fxcBU1	BU:12-93	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal L27 protein
e6fxcBv1	Bv:2-106	dsRBD-like	Ribosome binding protein Y (YfiA homologue)	Ribosome binding protein Y (YfiA homologue)
e6fxcBv2	Bv:131-187	Ribosome-associated factor Y	Ribosome-associated factor Y	Ribosome-associated factor Y
e6fxcBV1	BV:3-60	Ribosomal protein bL28-related	Ribosomal protein bL28-related	Ribosomal protein L28
e6fxcBW1	BW:2-68	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)
e6fxcBX1	BX:2-59	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e
e6fxcBY1	BY:1-59	Ribosomal protein L31p	Ribosomal protein L31p	Ribosomal protein L31p
e6fxcBZ1	BZ:2-49	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related