ECOD: domain e6fyyE3

Domain ID e6fyyE3

A: a+b two layers
X: beta-Grasp
H: Ubiquitin-related
T: Alpha-L RNA-binding motif
F: Ribosomal_S4e,S4,RS4NT

UID:	002427882
Type:	Automatic domain
Parent:	e8cdlh1
Range:	E:2-116
Ligands:	MET MG
PDB:	6fyy
PDB Description:	40S ribosomal protein S4
UniProt:	Q6CWJ2
Hsap BLAST neighbor:	P62701
Species:

Domains in the same chain:

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e6fyyE3	E:2-116	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e6fyyE2	E:117-175	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6fyyE1	E:176-261	SH3	SH3	SH3

Domains in the same PDB:

e6fyya1	a:2-104	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e6fyyA1	A:2-220	Flavodoxin-like	Ribosomal protein S2/SIS domain	Ribosomal protein S2/SIS domain
e6fyyb1	b:2-82	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6fyyB2	B:2-113	Ribosomal protein L25-like	40S ribosomal protein S3A N-terminal domain	40S ribosomal protein S3A N-terminal domain
e6fyyB1	B:114-233	T-fold	40S ribosomal protein S3A C-terminal domain	40S ribosomal protein S3A C-terminal domain
e6fyyc1	c:4-67	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6fyyC1	C:36-113	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)
e6fyyC2	C:114-180	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e6fyyC3	C:181-255	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e6fyyd1	d:2-56	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e6fyyD1	D:3-91	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e6fyyD2	D:92-229	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e6fyye1	e:2-61	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)
e6fyyE3	E:2-116	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e6fyyE2	E:117-175	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6fyyE1	E:176-261	SH3	SH3	SH3
e6fyyf1	f:77-150	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6fyyF1	F:22-227	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e6fyyg1	g:3-326	beta-propeller-like	beta-propeller	7-bladed
e6fyyG1	G:1-230	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein L25-like
e6fyyh1	h:1-25	Ribosomal protein L41-A	Ribosomal protein L41-A	Ribosomal protein L41-A
e6fyyH1	H:4-105	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e6fyyH2	H:106-187	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e6fyyi1	i:2-122	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6fyyI1	I:2-201	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e6fyyj3	j:3-89	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6fyyj1	j:90-178	HhH/H2TH	eIF2alpha middle domain	eIF2alpha middle domain
e6fyyj2	j:179-265	Alpha-beta plaits	eIF-2-alpha, C-terminal domain	eIF-2-alpha, C-terminal domain
e6fyyJ1	J:2-183	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e6fyyk3	k:98-145,k:188-305	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e6fyyk1	k:146-187	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6fyyk2	k:306-426	cradle loop barrel	RIFT-related	Alanine racemase-C
e6fyyk4	k:427-519	cradle loop barrel	RIFT-related	Aminomethyltransferase beta-barrel domain
e6fyyK1	K:1-96	HTH	HTH	winged
e6fyyl2	l:127-229	HTH	HTH	winged
e6fyyl1	l:229-270	Rubredoxin-like	Zinc-binding domain of translation initiation factor 2 beta	Zinc-binding domain of translation initiation factor 2 beta
e6fyyL1	L:2-156	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6fyym2	m:3-94	HTH	HTH	winged
e6fyym1	m:95-149	Rubredoxin-like	Zinc-binding domain of translation initiation factor 2 beta	Zinc-binding domain of translation initiation factor 2 beta
e6fyyM1	M:17-134	Bacillus chorismate mutase-like	L30e-like	L30e-like
e6fyyN2	N:1-82	HTH	40S ribosomal protein S13 N-terminal domain	40S ribosomal protein S13 N-terminal domain
e6fyyN1	N:83-151	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e6fyyO1	O:9-137	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e6fyyP1	P:13-129	Ribosomal protein S19	Ribosomal protein S19	Ribosomal protein S19
e6fyyQ1	Q:3-143	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e6fyyR1	R:2-131	HTH	HTH	FF domain
e6fyys1	s:1-342	beta-propeller-like	beta-propeller	7-bladed
e6fyyS1	S:2-146	HhH/H2TH	H2TH	H2TH
e6fyyT1	T:2-144	HTH	HTH	winged
e6fyyU1	U:15-120	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e6fyyV1	V:1-87	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)
e6fyyW2	W:2-67	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e6fyyW1	W:68-130	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e6fyyX1	X:2-145	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6fyyY1	Y:2-135	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e6fyyZ1	Z:28-105	HTH	HTH	winged