ECOD: domain e6gz3Au1

Domain ID e6gz3Au1

A: a+b two layers
X: a+b domain in Ribosomal protein L1
H: a+b domain in Ribosomal protein L1
T: a+b domain in Ribosomal protein L1
F: Ribosomal_L1

UID:	002426820
Type:	Automatic domain
Parent:	e1i2aA1
Range:	Au:1-57,Au:154-217
PDB:	6gz3
PDB Description:	Ribosomal protein
UniProt:	G1SKZ8
Hsap BLAST neighbor:	P62906
Species:	Oryctolagus cuniculus

Domains in the same chain:

Download Pymol

e6gz3Au1	Au:1-57,Au:154-217	a+b domain in Ribosomal protein L1	a+b domain in Ribosomal protein L1	a+b domain in Ribosomal protein L1
e6gz3Au2	Au:58-153	Flavodoxin-like	Rossmann-like domain in Ribosomal protein L1	Rossmann-like domain in Ribosomal protein L1

Domains in the same PDB:

e6gz3Aa1	Aa:2-148	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e6gz3AA2	AA:97-253	SH3	SH3	SH3
e6gz3AA1	AA:2-96	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6gz3Ab1	Ab:2-69	RPL29	RPL29	RPL29
e6gz3AB1	AB:2-395	cradle loop barrel	RIFT-related	Alanine racemase-C
e6gz3Ac1	Ac:7-109	Bacillus chorismate mutase-like	L30e-like	L30e-like
e6gz3AC1	AC:298-365	C-terminal helical region in 60S ribosomal protein L4 (L4p)	C-terminal helical region in 60S ribosomal protein L4 (L4p)	C-terminal helical region in 60S ribosomal protein L4 (L4p)
e6gz3AC2	AC:3-297	Ribosomal protein L4	Ribosomal protein L4	Ribosomal protein L4
e6gz3Ad1	Ad:18-123	Ribosomal protein L31e-like	Ribosomal protein L31e/gp120 outer domain	Ribosomal protein L31e/gp120 outer domain
e6gz3AD1	AD:4-297	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e6gz3Ae1	Ae:2-130	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L32e	Ribosomal protein L32e
e6gz3AE1	AE:95-288	SH3	SH3	SH3
e6gz3Af1	Af:2-110	cradle loop barrel	RIFT-related	Alanine racemase-C
e6gz3AF1	AF:15-248	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e
e6gz3Ag1	Ag:2-115	Glucocorticoid receptor-like	RPL34	RPL34
e6gz3AG1	AG:29-262	Bacillus chorismate mutase-like	L30e-like	L30e-like
e6gz3Ah1	Ah:2-123	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)
e6gz3AH2	AH:88-191	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e6gz3AH1	AH:1-87	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e6gz3Ai1	Ai:5-101	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)
e6gz3AI1	AI:3-213	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal protein L10e
e6gz3Aj1	Aj:2-85	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6gz3AJ1	AJ:9-107,AJ:127-177	Ribosomal protein L5	Ribosomal protein L5	Ribosomal protein L5
e6gz3Ak1	Ak:2-70	SRP9/14-like	Signal recognition particle alu RNA binding heterodimer SRP9/14-related	Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e6gz3AK2	AK:5-109,AK:183-206	Alpha-beta plaits	Ribosomal protein L10-like	Ribosomal protein L10-like
e6gz3AK1	AK:110-182	Insertion domain in 60S ribosomal protein rpP0 (L10P)	Insertion domain in 60S ribosomal protein rpP0 (L10P)	Insertion domain in 60S ribosomal protein rpP0 (L10P)
e6gz3Al1	Al:2-51	Ribosomal protein L39e	Ribosomal protein L39e	Ribosomal protein L39e
e6gz3AL1	AL:2-206	RPL13	RPL13	RPL13
e6gz3Am1	Am:78-127	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6gz3AM1	AM:2-140	SH3	SH3	SH3
e6gz3An1	An:1-25	Ribosomal protein L41-A	Ribosomal protein L41-A	Ribosomal protein L41-A
e6gz3AN1	AN:2-204	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e6gz3Ao1	Ao:2-106	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6gz3AO1	AO:5-199	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L13 and L16-A	Ribosomal protein L13 and L16-A
e6gz3Ap1	Ap:2-92	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6gz3AP1	AP:2-154	Enolase-N/ribosomal protein	Ribosomal protein L22	Ribosomal protein L22
e6gz3Aq1	Aq:13-73	Ribosomal protein L11/L12e N-terminal domain-like	Ribosomal protein L11/L12e N-terminal domain	Ribosomal protein L11/L12e N-terminal domain
e6gz3Aq2	Aq:74-163	HTH	HTH	Ribosomal protein L11, C-terminal domain
e6gz3AQ1	AQ:2-188	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e6gz3AR2	AR:57-182	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain
e6gz3AR1	AR:2-56	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain
e6gz3AS2	AS:73-175	GP2-like	RplX-like	RplX-like
e6gz3AS1	AS:1-72	GP2-like	RplX-like	RplX-like
e6gz3At1	At:2-123	RPL28	RPL28	RPL28
e6gz3AT1	AT:2-158	SH3	SH3	SH3
e6gz3Au1	Au:1-57,Au:154-217	a+b domain in Ribosomal protein L1	a+b domain in Ribosomal protein L1	a+b domain in Ribosomal protein L1
e6gz3Au2	Au:58-153	Flavodoxin-like	Rossmann-like domain in Ribosomal protein L1	Rossmann-like domain in Ribosomal protein L1
e6gz3AU1	AU:18-116	Ribosomal protein L22e	Ribosomal protein L22e	Ribosomal protein L22e
e6gz3AV1	AV:12-140	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e6gz3AW1	AW:2-122	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e6gz3AX1	AX:39-155	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e6gz3AY1	AY:1-127	SH3	SH3	SH3
e6gz3AZ1	AZ:3-136	SH3	SH3	SH3
e6gz3Ba1	Ba:2-98	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e6gz3BA1	BA:5-219	Flavodoxin-like	Ribosomal protein S2/SIS domain	Ribosomal protein S2/SIS domain
e6gz3Bb1	Bb:4-83	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6gz3BB1	BB:114-233	T-fold	40S ribosomal protein S3A C-terminal domain	40S ribosomal protein S3A C-terminal domain
e6gz3BB2	BB:22-113	Ribosomal protein L25-like	40S ribosomal protein S3A N-terminal domain	40S ribosomal protein S3A N-terminal domain
e6gz3Bc1	Bc:7-68	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6gz3BC2	BC:57-134	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)
e6gz3BC3	BC:135-201	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e6gz3BC1	BC:202-278	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e6gz3Bd1	Bd:5-55	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e6gz3BD1	BD:2-99	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e6gz3BD2	BD:92-221	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e6gz3Be1	Be:3-57	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)
e6gz3BE2	BE:117-175	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6gz3BE3	BE:2-116	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e6gz3BE1	BE:176-258	SH3	SH3	SH3
e6gz3Bf1	Bf:79-151	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6gz3BF1	BF:15-204	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e6gz3Bg1	Bg:2-315	beta-propeller-like	beta-propeller	7-bladed
e6gz3BG1	BG:1-232	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein L25-like
e6gz3BH2	BH:12-107	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e6gz3BH1	BH:108-194	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e6gz3BI1	BI:2-208	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e6gz3BJ1	BJ:2-180	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e6gz3BK1	BK:1-98	HTH	HTH	winged
e6gz3BL1	BL:6-158	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6gz3BM1	BM:11-130	Bacillus chorismate mutase-like	L30e-like	L30e-like
e6gz3BN2	BN:2-82	HTH	40S ribosomal protein S13 N-terminal domain	40S ribosomal protein S13 N-terminal domain
e6gz3BN1	BN:83-150	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e6gz3BO1	BO:16-151	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e6gz3BP1	BP:12-131	Ribosomal protein S19	Ribosomal protein S19	Ribosomal protein S19
e6gz3BQ1	BQ:8-146	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e6gz3BR1	BR:2-126	HTH	HTH	FF domain
e6gz3BS1	BS:4-142	HhH/H2TH	H2TH	H2TH
e6gz3BT1	BT:2-144	HTH	HTH	winged
e6gz3BU1	BU:20-116	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e6gz3BV1	BV:1-81	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)
e6gz3BW1	BW:2-67	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e6gz3BW2	BW:68-130	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e6gz3BX1	BX:2-142	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6gz3BY1	BY:4-128	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e6gz3BZ1	BZ:28-113	HTH	HTH	winged
e6gz3Ct1	Ct:498-576	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e6gz3Ct2	Ct:360-497	cradle loop barrel	RIFT-related	Alanine racemase-C
e6gz3Ct4	Ct:577-741	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e6gz3Ct3	Ct:5-359	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e6gz3Ct5	Ct:742-857	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like