ECOD: domain e6hcmu32

Domain ID e6hcmu32

A: a/b three-layered sandwiches
X: Flavodoxin-like
H: Rossmann-like domain in Ribosomal protein L1
T: Rossmann-like domain in Ribosomal protein L1
F: Ribosomal_L1

UID:	002414789
Type:	Automatic domain
Parent:	e1mzpA2
Range:	u3:58-153
PDB:	6hcm
PDB Description:	Ribosomal protein
UniProt:	G1SKZ8
Hsap BLAST neighbor:	P62906
Species:	Oryctolagus cuniculus

Domains in the same chain:

Download Pymol

e6hcmu32	u3:58-153	Flavodoxin-like	Rossmann-like domain in Ribosomal protein L1	Rossmann-like domain in Ribosomal protein L1
e6hcmu31	u3:1-57,u3:154-217	a+b domain in Ribosomal protein L1	a+b domain in Ribosomal protein L1	a+b domain in Ribosomal protein L1

Domains in the same PDB:

e6hcma11	a1:41-115	HTH	HTH	winged
e6hcma31	a3:2-148	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e6hcmA32	A3:2-96	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6hcmA31	A3:97-249	SH3	SH3	SH3
e6hcmb11	b1:2-102	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e6hcmB11	B1:2-218	Flavodoxin-like	Ribosomal protein S2/SIS domain	Ribosomal protein S2/SIS domain
e6hcmb31	b3:2-117	RPL29	RPL29	RPL29
e6hcmB31	B3:2-395	cradle loop barrel	RIFT-related	Alanine racemase-C
e6hcmc11	c1:2-84	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6hcmC12	C1:114-233	T-fold	40S ribosomal protein S3A C-terminal domain	40S ribosomal protein S3A C-terminal domain
e6hcmC11	C1:21-113	Ribosomal protein L25-like	40S ribosomal protein S3A N-terminal domain	40S ribosomal protein S3A N-terminal domain
e6hcmc31	c3:10-107	Bacillus chorismate mutase-like	L30e-like	L30e-like
e6hcmC32	C3:274-363	C-terminal helical region in 60S ribosomal protein L4 (L4p)	C-terminal helical region in 60S ribosomal protein L4 (L4p)	C-terminal helical region in 60S ribosomal protein L4 (L4p)
e6hcmC31	C3:2-273	Ribosomal protein L4	Ribosomal protein L4	Ribosomal protein L4
e6hcmd11	d1:7-68	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6hcmD11	D1:135-201	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e6hcmD13	D1:202-278	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e6hcmD12	D1:58-134	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)
e6hcmd31	d3:18-124	Ribosomal protein L31e-like	Ribosomal protein L31e/gp120 outer domain	Ribosomal protein L31e/gp120 outer domain
e6hcmD31	D3:3-295	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e6hcme11	e1:2-56	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e6hcmE11	E1:92-228	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e6hcmE12	E1:1-99	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e6hcme31	e3:2-129	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L32e	Ribosomal protein L32e
e6hcmE31	E3:41-291	SH3	SH3	SH3
e6hcmf11	f1:78-132	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)
e6hcmF11	F1:117-175	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6hcmF13	F1:176-263	SH3	SH3	SH3
e6hcmF12	F1:2-116	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e6hcmf31	f3:2-110	cradle loop barrel	RIFT-related	Alanine racemase-C
e6hcmF31	F3:23-247	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e
e6hcmg11	g1:83-150	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6hcmG11	G1:14-204	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e6hcmg31	g3:2-115	Glucocorticoid receptor-like	RPL34	RPL34
e6hcmG31	G3:80-319	Bacillus chorismate mutase-like	L30e-like	L30e-like
e6hcmh11	h1:2-314	beta-propeller-like	beta-propeller	7-bladed
e6hcmH11	H1:1-237	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein L25-like
e6hcmh31	h3:2-123	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)
e6hcmH31	H3:88-190	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e6hcmH32	H3:1-87	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e6hcmI11	I1:108-194	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e6hcmI12	I1:6-107	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e6hcmi31	i3:2-103	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)
e6hcmI31	I3:2-214	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal protein L10e
e6hcmj13	j1:143-276	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e6hcmj12	j1:6-142	N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1	N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1	N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
e6hcmj11	j1:277-424	Bacillus chorismate mutase-like	L30e-like	L30e-like
e6hcmJ11	J1:2-207	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e6hcmj31	j3:2-87	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6hcmJ31	J3:8-107,J3:127-177	Ribosomal protein L5	Ribosomal protein L5	Ribosomal protein L5
e6hcmk11	k1:329-597	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e6hcmk13	k1:4-77	4Fe-4S ferredoxin	4Fe-4S ferredoxin	4Fe-4S ferredoxin
e6hcmk12	k1:78-328	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e6hcmK11	K1:2-186	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e6hcmk31	k3:2-70	SRP9/14-like	Signal recognition particle alu RNA binding heterodimer SRP9/14-related	Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e6hcmL11	L1:1-96	HTH	HTH	winged
e6hcml31	l3:2-51	Ribosomal protein L39e	Ribosomal protein L39e	Ribosomal protein L39e
e6hcmL31	L3:2-211	RPL13	RPL13	RPL13
e6hcmM11	M1:3-153	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6hcmm31	m3:51-102	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6hcmM31	M3:2-139	SH3	SH3	SH3
e6hcmN11	N1:14-130	Bacillus chorismate mutase-like	L30e-like	L30e-like
e6hcmn31	n3:1-25	Ribosomal protein L41-A	Ribosomal protein L41-A	Ribosomal protein L41-A
e6hcmN31	N3:2-204	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e6hcmO12	O1:83-150	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e6hcmO11	O1:2-82	HTH	40S ribosomal protein S13 N-terminal domain	40S ribosomal protein S13 N-terminal domain
e6hcmo31	o3:2-105	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6hcmO31	O3:5-203	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L13 and L16-A	Ribosomal protein L13 and L16-A
e6hcmP11	P1:16-151	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e6hcmp31	p3:2-92	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6hcmP31	P3:2-154	Enolase-N/ribosomal protein	Ribosomal protein L22	Ribosomal protein L22
e6hcmQ11	Q1:12-131	Ribosomal protein S19	Ribosomal protein S19	Ribosomal protein S19
e6hcmQ31	Q3:2-188	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e6hcmR11	R1:5-146	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e6hcmr31	r3:2-125	RPL28	RPL28	RPL28
e6hcmR31	R3:57-181	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain
e6hcmR32	R3:2-56	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain
e6hcmS11	S1:2-133	HTH	HTH	FF domain
e6hcms32	s3:110-182	Insertion domain in 60S ribosomal protein rpP0 (L10P)	Insertion domain in 60S ribosomal protein rpP0 (L10P)	Insertion domain in 60S ribosomal protein rpP0 (L10P)
e6hcms31	s3:5-109,s3:183-200	Alpha-beta plaits	Ribosomal protein L10-like	Ribosomal protein L10-like
e6hcmS31	S3:73-176	GP2-like	RplX-like	RplX-like
e6hcmS32	S3:1-72	GP2-like	RplX-like	RplX-like
e6hcmT11	T1:2-145	HhH/H2TH	H2TH	H2TH
e6hcmt32	t3:74-161	HTH	HTH	Ribosomal protein L11, C-terminal domain
e6hcmt31	t3:9-73	Ribosomal protein L11/L12e N-terminal domain-like	Ribosomal protein L11/L12e N-terminal domain	Ribosomal protein L11/L12e N-terminal domain
e6hcmT31	T3:2-160	SH3	SH3	SH3
e6hcmU11	U1:3-143	HTH	HTH	winged
e6hcmu32	u3:58-153	Flavodoxin-like	Rossmann-like domain in Ribosomal protein L1	Rossmann-like domain in Ribosomal protein L1
e6hcmu31	u3:1-57,u3:154-217	a+b domain in Ribosomal protein L1	a+b domain in Ribosomal protein L1	a+b domain in Ribosomal protein L1
e6hcmU31	U3:17-115	Ribosomal protein L22e	Ribosomal protein L22e	Ribosomal protein L22e
e6hcmV11	V1:18-117	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e6hcmV31	V3:10-140	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e6hcmW11	W1:1-83	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)
e6hcmW31	W3:1-121	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e6hcmX12	X1:2-67	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e6hcmX11	X1:68-130	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e6hcmX31	X3:39-156	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e6hcmY11	Y1:2-142	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6hcmY31	Y3:1-134	SH3	SH3	SH3
e6hcmZ11	Z1:4-127	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e6hcmZ31	Z3:2-136	SH3	SH3	SH3