Domain ID e6hlsB3

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  • A: a+b complex topology
  • X: inserted a+b domain in yeast RNA polymerase beta subunit
  • H: inserted a+b domain in yeast RNA polymerase beta subunit
  • T: inserted a+b domain in yeast RNA polymerase beta subunit
  • F: RNA_pol_Rpa2_4
UID: 002465878
Type: Automatic domain
Parent: e4c2mB3
Range: B:548-646
PDB: 6hls
PDB Description: DNA-directed RNA polymerase I subunit RPA135
UniProt: P22138
Hsap BLAST neighbor: Q9H9Y6
Species:

Structure of domain e6hlsB3

Domains in the same chain:

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e6hlsB4 B:10-209,B:401-547 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6hlsB2 B:210-400 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e6hlsB3 B:548-646 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e6hlsB1 B:647-761 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e6hlsB6 B:762-798,B:912-1040 cradle loop barrel RIFT-related double psi
e6hlsB5 B:799-911 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6hlsB7 B:1041-1203 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase

Domains in the same PDB:

e6hlsA3 A:1-140,A:175-268,A:312-463 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e6hlsA5 A:464-505,A:581-665 cradle loop barrel RIFT-related double psi
e6hlsA6 A:506-580 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6hlsA9 A:666-826 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e6hlsA8 A:827-1053 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e6hlsA2 A:1054-1180 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase I RPA190 subunit third helical domain in yeast RNA-polymerase I RPA190 subunit
e6hlsA7 A:1181-1234,A:1545-1663 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e6hlsA1 A:1235-1261,A:1498-1544 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6hlsA4 A:1262-1338,A:1440-1497 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6hlsB4 B:10-209,B:401-547 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6hlsB2 B:210-400 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e6hlsB3 B:548-646 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e6hlsB1 B:647-761 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e6hlsB6 B:762-798,B:912-1040 cradle loop barrel RIFT-related double psi
e6hlsB5 B:799-911 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6hlsB7 B:1041-1203 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6hlsC1 C:30-75,C:222-333 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6hlsC2 C:76-221 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e6hlsD1 D:12-49,D:80-100 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e6hlsE1 E:2-143 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e6hlsE2 E:144-215 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e6hlsF1 F:55-154 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e6hlsG2 G:37-126 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e6hlsG1 G:127-174,G:215-251 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6hlsH1 H:3-146 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6hlsI2 I:2-67 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6hlsI1 I:68-125 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6hlsJ1 J:1-69 HTH RPB10 RPB10
e6hlsK1 K:45-142 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6hlsL1 L:27-70 Rubredoxin-like Rubredoxin-related Rubredoxin-related