Domain ID e6i84E2

Download files:
  • A: a/b three-layered sandwiches
  • X: Restriction endonuclease-like
  • H: Eukaryotic RPB5 N-terminal domain
  • T: Eukaryotic RPB5 N-terminal domain
  • F: RNA_pol_Rpb5_N
UID: 002429742
Type: Automatic domain
Parent: e1dzfA2
Range: E:2-143
PDB: 6i84
PDB Description: DNA-directed RNA polymerases I, II, and III subunit RPABC1
UniProt: P20434
Hsap BLAST neighbor: P19388
Species:

Structure of domain e6i84E2

Domains in the same chain:

Download Pymol

e6i84E2 E:2-143 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e6i84E1 E:144-215 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit

Domains in the same PDB:

e6i84A1 A:2-336 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e6i84A6 A:337-374,A:436-519 cradle loop barrel RIFT-related double psi
e6i84A5 A:375-435 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6i84A2 A:520-662 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e6i84A7 A:663-871 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e6i84A8 A:872-1059 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e6i84A3 A:1060-1102,A:1301-1455 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e6i84A4 A:1103-1131,A:1243-1300 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6i84A9 A:1132-1242 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6i84B2 B:20-70,B:90-134,B:164-218,B:405-541 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6i84B6 B:219-404 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e6i84B7 B:542-630 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e6i84B1 B:631-813 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e6i84B4 B:814-850,B:975-1097 cradle loop barrel RIFT-related double psi
e6i84B3 B:851-974 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6i84B5 B:1098-1224 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6i84C1 C:3-37,C:173-268 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6i84C2 C:38-172 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e6i84D1 D:3-71,D:131-221 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e6i84E2 E:2-143 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e6i84E1 E:144-215 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e6i84F1 F:69-155 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e6i84G1 G:1-68 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e6i84G2 G:69-171 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6i84H1 H:2-146 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6i84I1 I:1-48 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6i84I2 I:49-119 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6i84J1 J:1-65 HTH RPB10 RPB10
e6i84K1 K:1-114 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6i84L1 L:25-70 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6i84M1 M:38-134 Histone-like Histone-related Histone
e6i84O1 O:20-102 Histone-like Histone-related Histone
e6i84Q1 Q:16-118 Histone-like Histone-related Histone
e6i84R1 R:28-122 Histone-like Histone-related Histone
e6i84S1 S:39-135 Histone-like Histone-related Histone
e6i84U1 U:25-102 Histone-like Histone-related Histone
e6i84V1 V:14-118 Histone-like Histone-related Histone
e6i84W1 W:29-121 Histone-like Histone-related Histone