ECOD: domain e6kf4C4

Domain ID e6kf4C4

A: a+b complex topology
X: central helical domain in RNA-polymerase beta-prime subunit
H: central helical domain in RNA-polymerase beta-prime subunit
T: central helical domain in RNA-polymerase beta-prime subunit
F: RNA_pol_Rpb1_5

UID:	002629848
Type:	Automatic domain
Parent:	e5fj8A6
Range:	C:60-109,C:268-389
PDB:	6kf4
PDB Description:	DNA-directed RNA polymerase subunit A''
Species:

Domains in the same chain:

Download Pymol

e6kf4C1	C:2-59	helical domain in yeast RNA-polymerases	third helical domain in yeast RNA-polymerase II beta-prime subunit	third helical domain in yeast RNA-polymerase II beta-prime subunit
e6kf4C4	C:60-109,C:268-389	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit
e6kf4C2	C:110-141,C:225-267	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6kf4C3	C:142-224	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit

Domains in the same PDB:

e6kf4A4	A:4-312	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit
e6kf4A3	A:313-499	cradle loop barrel	RIFT-related	double psi
e6kf4A2	A:500-666	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit
e6kf4A1	A:667-904	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit
e6kf4B2	B:9-174,B:347-484	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6kf4B7	B:173-346	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase
e6kf4B6	B:485-574	inserted a+b domain in yeast RNA polymerase beta subunit	inserted a+b domain in yeast RNA polymerase beta subunit	inserted a+b domain in yeast RNA polymerase beta subunit
e6kf4B1	B:574-713	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase
e6kf4B3	B:714-751,B:877-999	cradle loop barrel	RIFT-related	double psi
e6kf4B5	B:752-876	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6kf4B4	B:1000-1009,B:1032-1122	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6kf4C1	C:2-59	helical domain in yeast RNA-polymerases	third helical domain in yeast RNA-polymerase II beta-prime subunit	third helical domain in yeast RNA-polymerase II beta-prime subunit
e6kf4C4	C:60-109,C:268-389	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit
e6kf4C2	C:110-141,C:225-267	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6kf4C3	C:142-224	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6kf4D2	D:2-37,D:149-188,D:208-258	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e6kf4D1	D:38-148	Ribosomal protein TL5/L25 C-terminal domain-like	Insert subdomain of RNA polymerase alpha subunit	Insert subdomain of RNA polymerase alpha subunit
e6kf4E2	E:1-78	Dodecin subunit-like	Flavin-binding protein dodecin-like	Flavin-binding protein dodecin-like
e6kf4E1	E:79-181	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6kf4F1	F:1-122	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e6kf4G1	G:4-86	HTH	HTH	winged
e6kf4G2	G:87-169	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6kf4H1	H:6-81	RPB5-like RNA polymerase subunit	RPB5-like RNA polymerase subunit	RPB5-like RNA polymerase subunit
e6kf4K1	K:2-57	RPB6/omega subunit-like	RPB6/omega subunit-like	RPB6
e6kf4L1	L:1-94	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e6kf4N1	N:1-65	HTH	RPB10	RPB10
e6kf4P1	P:8-49	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related