ECOD: domain e6mtcA1

Domain ID e6mtcA1

A: beta barrels
X: OB-fold
H: Nucleic acid-binding proteins
T: Nucleic acid-binding proteins
F: Ribosomal_L2

UID:	002416441
Type:	Automatic domain
Parent:	e1rl2A1
Range:	A:2-96
PDB:	6mtc
PDB Description:	60S ribosomal protein L8
UniProt:	G1TT27
Hsap BLAST neighbor:	P62917
Species:	Oryctolagus cuniculus

Domains in the same chain:

Download Pymol

e6mtcA1	A:2-96	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6mtcA2	A:97-249	SH3	SH3	SH3

Domains in the same PDB:

e6mtca1	a:2-148	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e6mtcA1	A:2-96	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6mtcA2	A:97-249	SH3	SH3	SH3
e6mtcaa1	aa:2-102	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e6mtcAA1	AA:2-218	Flavodoxin-like	Ribosomal protein S2/SIS domain	Ribosomal protein S2/SIS domain
e6mtcb1	b:2-117	RPL29	RPL29	RPL29
e6mtcB1	B:2-395	cradle loop barrel	RIFT-related	Alanine racemase-C
e6mtcbb1	bb:2-84	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6mtcBB1	BB:21-113	Ribosomal protein L25-like	40S ribosomal protein S3A N-terminal domain	40S ribosomal protein S3A N-terminal domain
e6mtcBB2	BB:114-233	T-fold	40S ribosomal protein S3A C-terminal domain	40S ribosomal protein S3A C-terminal domain
e6mtcc1	c:10-107	Bacillus chorismate mutase-like	L30e-like	L30e-like
e6mtcC1	C:2-273	Ribosomal protein L4	Ribosomal protein L4	Ribosomal protein L4
e6mtcC2	C:274-363	C-terminal helical region in 60S ribosomal protein L4 (L4p)	C-terminal helical region in 60S ribosomal protein L4 (L4p)	C-terminal helical region in 60S ribosomal protein L4 (L4p)
e6mtccc1	cc:7-68	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6mtcCC3	CC:202-278	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e6mtcCC1	CC:58-134	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)
e6mtcCC2	CC:135-201	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e6mtcd1	d:18-124	Ribosomal protein L31e-like	Ribosomal protein L31e/gp120 outer domain	Ribosomal protein L31e/gp120 outer domain
e6mtcD1	D:3-295	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e6mtcdd1	dd:2-56	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e6mtcDD1	DD:1-99	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e6mtcDD2	DD:92-228	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e6mtce1	e:2-129	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L32e	Ribosomal protein L32e
e6mtcE1	E:41-291	SH3	SH3	SH3
e6mtcee1	ee:78-132	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)
e6mtcEE3	EE:2-116	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e6mtcEE1	EE:176-263	SH3	SH3	SH3
e6mtcEE2	EE:117-175	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6mtcf1	f:2-110	cradle loop barrel	RIFT-related	Alanine racemase-C
e6mtcF1	F:23-247	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e
e6mtcff1	ff:83-150	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6mtcFF1	FF:14-204	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e6mtcg1	g:2-115	Glucocorticoid receptor-like	RPL34	RPL34
e6mtcG1	G:80-319	Bacillus chorismate mutase-like	L30e-like	L30e-like
e6mtcgg1	gg:2-314	beta-propeller-like	beta-propeller	7-bladed
e6mtcGG1	GG:1-237	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein L25-like
e6mtch1	h:2-123	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)
e6mtcH2	H:1-87	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e6mtcH1	H:88-190	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e6mtcHH1	HH:6-107	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e6mtcHH2	HH:108-194	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e6mtci1	i:2-103	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)
e6mtcI1	I:2-214	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal protein L10e
e6mtcII1	II:2-207	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e6mtcj1	j:2-87	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6mtcJ1	J:8-107,J:127-177	Ribosomal protein L5	Ribosomal protein L5	Ribosomal protein L5
e6mtcJJ1	JJ:2-186	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e6mtck1	k:2-70	SRP9/14-like	Signal recognition particle alu RNA binding heterodimer SRP9/14-related	Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e6mtcKK1	KK:1-96	HTH	HTH	winged
e6mtcl1	l:2-51	Ribosomal protein L39e	Ribosomal protein L39e	Ribosomal protein L39e
e6mtcL1	L:2-211	RPL13	RPL13	RPL13
e6mtcLL1	LL:3-153	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6mtcm1	m:51-102	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6mtcM1	M:2-139	SH3	SH3	SH3
e6mtcMM1	MM:14-130	Bacillus chorismate mutase-like	L30e-like	L30e-like
e6mtcn1	n:1-25	Ribosomal protein L41-A	Ribosomal protein L41-A	Ribosomal protein L41-A
e6mtcN1	N:2-204	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e6mtcNN2	NN:2-82	HTH	40S ribosomal protein S13 N-terminal domain	40S ribosomal protein S13 N-terminal domain
e6mtcNN1	NN:83-150	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e6mtco1	o:2-104	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6mtcO1	O:5-203	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L13 and L16-A	Ribosomal protein L13 and L16-A
e6mtcOO1	OO:16-151	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e6mtcp1	p:2-92	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6mtcP1	P:2-154	Enolase-N/ribosomal protein	Ribosomal protein L22	Ribosomal protein L22
e6mtcPP1	PP:12-131	Ribosomal protein S19	Ribosomal protein S19	Ribosomal protein S19
e6mtcQ1	Q:2-188	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e6mtcQQ1	QQ:5-146	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e6mtcr1	r:2-125	RPL28	RPL28	RPL28
e6mtcR1	R:2-56	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain
e6mtcR2	R:57-181	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain
e6mtcRR1	RR:2-133	HTH	HTH	FF domain
e6mtcS2	S:1-72	GP2-like	RplX-like	RplX-like
e6mtcS1	S:73-176	GP2-like	RplX-like	RplX-like
e6mtcSS1	SS:2-145	HhH/H2TH	H2TH	H2TH
e6mtcT1	T:2-160	SH3	SH3	SH3
e6mtcTT1	TT:3-143	HTH	HTH	winged
e6mtcu2	u:5-57,u:154-210	a+b domain in Ribosomal protein L1	a+b domain in Ribosomal protein L1	a+b domain in Ribosomal protein L1
e6mtcu1	u:58-153	Flavodoxin-like	Rossmann-like domain in Ribosomal protein L1	Rossmann-like domain in Ribosomal protein L1
e6mtcU1	U:17-115	Ribosomal protein L22e	Ribosomal protein L22e	Ribosomal protein L22e
e6mtcUU1	UU:18-117	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e6mtcv1	v:71-441	Repetitive alpha hairpins	ARM repeat	ARM repeat
e6mtcV1	V:10-140	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e6mtcVV1	VV:1-83	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)
e6mtcW1	W:1-121	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e6mtcWW2	WW:2-67	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e6mtcWW1	WW:68-130	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e6mtcX1	X:39-156	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e6mtcXX1	XX:2-142	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6mtcY1	Y:1-134	SH3	SH3	SH3
e6mtcYY1	YY:4-127	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e6mtcZ1	Z:2-136	SH3	SH3	SH3
e6mtcZZ1	ZZ:41-115	HTH	HTH	winged