Domain ID e6mtdm1

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  • A: few secondary structure elements
  • X: Rubredoxin-like
  • H: Rubredoxin-related
  • T: Rubredoxin-related
  • F: Ribosomal_L40e
UID: 002416573
Type: Automatic domain
Parent: e2ayjA1
Range: m:51-102
Ligands: ZN
PDB: 6mtd
PDB Description: eL40
Hsap BLAST neighbor: P62987
Species: Oryctolagus cuniculus

Structure of domain e6mtdm1

Domains in the same chain:

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e6mtdm1 m:51-102 Rubredoxin-like Rubredoxin-related Rubredoxin-related

Domains in the same PDB:

e6mtda1 a:2-148 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e6mtdA2 A:2-96 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6mtdA1 A:97-249 SH3 SH3 SH3
e6mtdaa1 aa:2-102 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e6mtdAA1 AA:2-218 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e6mtdb1 b:2-117 RPL29 RPL29 RPL29
e6mtdB1 B:2-395 cradle loop barrel RIFT-related Alanine racemase-C
e6mtdbb1 bb:2-84 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6mtdBB1 BB:114-233 T-fold 40S ribosomal protein S3A C-terminal domain 40S ribosomal protein S3A C-terminal domain
e6mtdBB2 BB:21-113 Ribosomal protein L25-like 40S ribosomal protein S3A N-terminal domain 40S ribosomal protein S3A N-terminal domain
e6mtdc1 c:10-107 Bacillus chorismate mutase-like L30e-like L30e-like
e6mtdC1 C:2-273 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e6mtdC2 C:274-363 C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p)
e6mtdcc1 cc:7-68 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6mtdCC3 CC:135-201 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e6mtdCC2 CC:202-278 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6mtdCC1 CC:58-134 N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p)
e6mtdd1 d:18-124 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e6mtdD1 D:3-295 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e6mtddd1 dd:2-56 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e6mtdDD2 DD:92-228 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e6mtdDD1 DD:1-99 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e6mtde1 e:2-129 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e6mtdE1 E:41-291 SH3 SH3 SH3
e6mtdee1 ee:78-132 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e)
e6mtdEE2 EE:117-175 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6mtdEE3 EE:176-263 SH3 SH3 SH3
e6mtdEE1 EE:2-116 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e6mtdf1 f:2-110 cradle loop barrel RIFT-related Alanine racemase-C
e6mtdF1 F:23-247 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e6mtdff1 ff:83-150 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6mtdFF1 FF:14-204 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e6mtdg1 g:2-115 Glucocorticoid receptor-like RPL34 RPL34
e6mtdG1 G:80-319 Bacillus chorismate mutase-like L30e-like L30e-like
e6mtdgg1 gg:2-314 beta-propeller-like beta-propeller 7-bladed
e6mtdGG1 GG:1-237 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e6mtdh1 h:2-123 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e6mtdH2 H:1-87 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e6mtdH1 H:88-190 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e6mtdHH2 HH:108-194 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e6mtdHH1 HH:6-107 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e6mtdi1 i:2-103 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e)
e6mtdI1 I:2-214 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e6mtdII1 II:2-207 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e6mtdj1 j:2-87 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6mtdJ1 J:8-107,J:127-177 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e6mtdJJ1 JJ:2-186 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e6mtdk1 k:2-70 SRP9/14-like Signal recognition particle alu RNA binding heterodimer SRP9/14-related Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e6mtdKK1 KK:1-96 HTH HTH winged
e6mtdl1 l:2-51 Ribosomal protein L39e Ribosomal protein L39e Ribosomal protein L39e
e6mtdL1 L:2-211 RPL13 RPL13 RPL13
e6mtdLL1 LL:3-153 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6mtdm1 m:51-102 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6mtdM1 M:2-139 SH3 SH3 SH3
e6mtdMM1 MM:14-130 Bacillus chorismate mutase-like L30e-like L30e-like
e6mtdn1 n:1-25 Ribosomal protein L41-A Ribosomal protein L41-A Ribosomal protein L41-A
e6mtdN1 N:2-204 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e6mtdNN1 NN:83-150 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e6mtdNN2 NN:2-82 HTH 40S ribosomal protein S13 N-terminal domain 40S ribosomal protein S13 N-terminal domain
e6mtdo1 o:2-104 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6mtdO1 O:5-203 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e6mtdOO1 OO:16-151 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e6mtdp1 p:2-92 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6mtdP1 P:2-154 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e6mtdPP1 PP:12-131 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e6mtdQ1 Q:2-188 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e6mtdQQ1 QQ:5-146 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6mtdr1 r:2-125 RPL28 RPL28 RPL28
e6mtdR2 R:2-56 Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain
e6mtdR1 R:57-181 Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain
e6mtdRR1 RR:2-133 HTH HTH FF domain
e6mtds1 s:5-109,s:183-200 Alpha-beta plaits Ribosomal protein L10-like Ribosomal protein L10-like
e6mtds2 s:110-182 Insertion domain in 60S ribosomal protein rpP0 (L10P) Insertion domain in 60S ribosomal protein rpP0 (L10P) Insertion domain in 60S ribosomal protein rpP0 (L10P)
e6mtdS2 S:1-72 GP2-like RplX-like RplX-like
e6mtdS1 S:73-176 GP2-like RplX-like RplX-like
e6mtdSS1 SS:2-145 HhH/H2TH H2TH H2TH
e6mtdt2 t:9-73 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e6mtdt1 t:74-161 HTH HTH Ribosomal protein L11, C-terminal domain
e6mtdT1 T:2-160 SH3 SH3 SH3
e6mtdTT1 TT:3-143 HTH HTH winged
e6mtdu2 u:5-57,u:154-210 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e6mtdu1 u:58-153 Flavodoxin-like Rossmann-like domain in Ribosomal protein L1 Rossmann-like domain in Ribosomal protein L1
e6mtdU1 U:17-115 Ribosomal protein L22e Ribosomal protein L22e Ribosomal protein L22e
e6mtdUU1 UU:18-117 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e6mtdv2 v:2-359 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6mtdv5 v:360-497 cradle loop barrel RIFT-related Alanine racemase-C
e6mtdv3 v:498-576 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e6mtdv1 v:577-741 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6mtdv4 v:742-858 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e6mtdV1 V:10-140 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e6mtdVV1 VV:1-83 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e)
e6mtdW1 W:1-121 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e6mtdWW2 WW:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e6mtdWW1 WW:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e6mtdX1 X:39-156 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e6mtdXX1 XX:2-142 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6mtdY1 Y:1-134 SH3 SH3 SH3
e6mtdYY1 YY:4-127 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e6mtdZ1 Z:2-136 SH3 SH3 SH3
e6mtdZZ1 ZZ:41-115 HTH HTH winged