Domain ID e6olfn1

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  • A: few secondary structure elements
  • X: Rubredoxin-like
  • H: Rubredoxin-related
  • T: Rubredoxin-related
  • F: Ribosomal_L40e
UID: 002501868
Type: Automatic domain
Parent: e2ayjA1
Range: n:78-127
PDB: 6olf
PDB Description: 60S ribosomal protein L40
UniProt: P62987
Hsap BLAST neighbor: P62987
Species: Homo sapiens

Structure of domain e6olfn1

Domains in the same chain:

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e6olfn1 n:78-127 Rubredoxin-like Rubredoxin-related Rubredoxin-related

Domains in the same PDB:

e6olfa1 a:3-136 SH3 SH3 SH3
e6olfA2 A:2-96 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6olfA1 A:97-253 SH3 SH3 SH3
e6olfb1 b:2-148 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e6olfB1 B:2-398 cradle loop barrel RIFT-related Alanine racemase-C
e6olfc1 c:2-69,c:91-122 RPL29 RPL29 RPL29
e6olfC2 C:3-297 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e6olfC1 C:298-365 C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p)
e6olfd1 d:7-109 Bacillus chorismate mutase-like L30e-like L30e-like
e6olfe1 e:18-123 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e6olff1 f:2-130 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e6olfF1 F:4-297 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e6olfg1 g:2-110 cradle loop barrel RIFT-related Alanine racemase-C
e6olfG1 G:42-288 SH3 SH3 SH3
e6olfh1 h:2-115 Glucocorticoid receptor-like RPL34 RPL34
e6olfH1 H:24-248 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e6olfi1 i:2-123 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e6olfI1 I:29-262 Bacillus chorismate mutase-like L30e-like L30e-like
e6olfj1 j:5-101 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e)
e6olfJ2 J:1-87 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e6olfJ1 J:88-191 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e6olfk1 k:2-85 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6olfK1 K:3-213 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e6olfl1 l:2-70 SRP9/14-like Signal recognition particle alu RNA binding heterodimer SRP9/14-related Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e6olfL1 L:9-107,L:127-177 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e6olfm1 m:2-51 Ribosomal protein L39e Ribosomal protein L39e Ribosomal protein L39e
e6olfM1 M:2-206 RPL13 RPL13 RPL13
e6olfn1 n:78-127 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6olfN1 N:2-140 SH3 SH3 SH3
e6olfo1 o:1-25 Ribosomal protein L41-A Ribosomal protein L41-A Ribosomal protein L41-A
e6olfO1 O:2-204 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e6olfp1 p:2-106 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6olfP1 P:5-199 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e6olfq1 q:2-92 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6olfQ1 Q:2-154 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e6olfr1 r:2-123 RPL28 RPL28 RPL28
e6olfR1 R:2-188 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e6olfS1 S:2-56 Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain
e6olfS2 S:57-182 Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain
e6olfSa1 Sa:2-103 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e6olfSA1 SA:3-223 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e6olfSb1 Sb:2-83 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6olfSB1 SB:114-234 T-fold 40S ribosomal protein S3A C-terminal domain 40S ribosomal protein S3A C-terminal domain
e6olfSB2 SB:21-113 Ribosomal protein L25-like 40S ribosomal protein S3A N-terminal domain 40S ribosomal protein S3A N-terminal domain
e6olfSc1 Sc:5-68 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6olfSC1 SC:202-278 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6olfSC3 SC:135-201 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e6olfSC2 SC:59-134 N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p)
e6olfSd1 Sd:2-56 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e6olfSD1 SD:92-227 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e6olfSD2 SD:2-99 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e6olfSe1 Se:2-58 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e)
e6olfSE1 SE:176-260 SH3 SH3 SH3
e6olfSE2 SE:2-116 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e6olfSE3 SE:117-175 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6olfSf1 Sf:85-151 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6olfSF1 SF:16-204 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e6olfSg1 Sg:3-314 beta-propeller-like beta-propeller 7-bladed
e6olfSG1 SG:1-237 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e6olfSH2 SH:108-193 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e6olfSH1 SH:5-107 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e6olfSI1 SI:2-205 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e6olfSJ1 SJ:2-186 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e6olfSK1 SK:1-98 HTH HTH winged
e6olfSL1 SL:2-154 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6olfSM1 SM:15-132 Bacillus chorismate mutase-like L30e-like L30e-like
e6olfSN2 SN:2-82 HTH 40S ribosomal protein S13 N-terminal domain 40S ribosomal protein S13 N-terminal domain
e6olfSN1 SN:83-151 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e6olfSO1 SO:15-151 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e6olfSP1 SP:10-136 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e6olfSQ1 SQ:1-146 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6olfSR1 SR:2-135 HTH HTH FF domain
e6olfSS1 SS:1-145 HhH/H2TH H2TH H2TH
e6olfST1 ST:2-144 HTH HTH winged
e6olfSU1 SU:16-119 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e6olfSV1 SV:1-82 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e)
e6olfSW2 SW:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e6olfSW1 SW:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e6olfSX1 SX:2-142 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6olfSY1 SY:2-132 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e6olfSZ1 SZ:43-115 HTH HTH winged
e6olfT1 T:1-72 GP2-like RplX-like RplX-like
e6olfT2 T:73-175 GP2-like RplX-like RplX-like
e6olfU1 U:2-158 SH3 SH3 SH3
e6olfV1 V:18-116 Ribosomal protein L22e Ribosomal protein L22e Ribosomal protein L22e
e6olfW1 W:12-140 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e6olfX1 X:2-122 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e6olfY1 Y:39-155 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e6olfZ1 Z:1-134 SH3 SH3 SH3