Domain ID e6qdvC4

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: GTP_EFTU,EFTUD2
UID: 002448737
Type: Automatic and representative domain
Parent: e1h65A1
Range: C:56-439
Ligands: GTP MG
PDB: 6qdv
PDB Description: 116 kDa U5 small nuclear ribonucleoprotein component
UniProt: Q15029
Hsap BLAST neighbor: Q15029
Species: Homo sapiens

Structure of domain e6qdvC4

Domains in the same chain:

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e6qdvC4 C:56-439 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6qdvC2 C:440-580 cradle loop barrel RIFT-related Alanine racemase-C
e6qdvC3 C:581-659 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e6qdvC1 C:660-828 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6qdvC5 C:829-954 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like

Domains in the same PDB:

e6qdv71 7:22-242 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6qdv72 7:243-411 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6qdv81 8:64-154 Alpha-beta plaits RNA-binding domain, RBD RNA-binding domain, RBD
e6qdv91 9:5-148 Mago nashi protein Mago nashi protein Mago nashi protein
e6qdvA5 A:25-810 Pre-mRNA-splicing factor 8 N-terminal domain Pre-mRNA-splicing factor 8 N-terminal domain Pre-mRNA-splicing factor 8 N-terminal domain
e6qdvA3 A:811-1182 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e6qdvA4 A:1183-1502 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e6qdvA1 A:1503-1754 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e6qdvA2 A:1755-2019 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e6qdvA6 A:2067-2314 Cytidine deaminase-like Cytidine deaminase-like Cytidine deaminase-like
e6qdvb1 b:6-87 SH3 SH3 SH3
e6qdvB1 B:404-682 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6qdvB11 B:683-886 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6qdvB5 B:887-993 HTH HTH winged
e6qdvB9 B:994-1125 Sec63 N-terminal subdomain-like Sec63 N-terminal subdomain-like Sec63 N-terminal subdomain-like
e6qdvB6 B:1126-1180 HhH/H2TH SAM-like subdomain in Sec63-like proteins SAM-like subdomain in Sec63-like proteins
e6qdvB8 B:1181-1311 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e6qdvB4 B:1312-1520 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6qdvB10 B:1521-1722 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6qdvB12 B:1723-1824 HTH HTH winged
e6qdvB7 B:1825-1957 Sec63 N-terminal subdomain-like Sec63 N-terminal subdomain-like Sec63 N-terminal subdomain-like
e6qdvB3 B:1958-2015 HhH/H2TH SAM-like subdomain in Sec63-like proteins SAM-like subdomain in Sec63-like proteins
e6qdvB2 B:2016-2125 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e6qdvC4 C:56-439 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6qdvC2 C:440-580 cradle loop barrel RIFT-related Alanine racemase-C
e6qdvC3 C:581-659 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e6qdvC1 C:660-828 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6qdvC5 C:829-954 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e6qdvd1 d:2-85 SH3 SH3 SH3
e6qdve1 e:13-91 SH3 SH3 SH3
e6qdvf1 f:4-75 SH3 SH3 SH3
e6qdvg1 g:4-76 SH3 SH3 SH3
e6qdvh1 h:1-80 SH3 SH3 SH3
e6qdvH2 H:149-406 Repetitive alpha hairpins ARM repeat ARM repeat
e6qdvH1 H:448-648 Repetitive alpha hairpins ARM repeat ARM repeat
e6qdvi1 i:3-166 Cyclophilin-like Cyclophilin-like Cyclophilin-like
e6qdvj1 j:13-115 SH3 SH3 SH3
e6qdvJ1 J:185-504 beta-propeller-like beta-propeller 7-bladed
e6qdvk1 k:6-87 SH3 SH3 SH3
e6qdvl1 l:1-80 SH3 SH3 SH3
e6qdvL1 L:1-144 Pre-mRNA-splicing factor BUD31 Pre-mRNA-splicing factor BUD31 Pre-mRNA-splicing factor BUD31
e6qdvm1 m:13-115 SH3 SH3 SH3
e6qdvM3 M:18-89 RING/U-box-like RING/U-box-like FYVE/PHD zinc finger
e6qdvM1 M:90-220 CCCH zinc finger CCCH zinc finger CCCH zinc finger
e6qdvM2 M:221-306 Alpha-beta plaits RNA-binding domain, RBD RNA-binding domain, RBD
e6qdvn1 n:2-84 SH3 SH3 SH3
e6qdvN1 N:52-357 beta-propeller-like beta-propeller 7-bladed
e6qdvo1 o:67-579 beta-propeller-like beta-propeller 7-bladed
e6qdvp1 p:11-91 SH3 SH3 SH3
e6qdvq1 q:4-75 SH3 SH3 SH3
e6qdvr1 r:4-76 SH3 SH3 SH3
e6qdvS1 S:176-802 Repetitive alpha hairpins ARM repeat ARM repeat
e6qdvT1 T:19-30,T:33-749 Repetitive alpha hairpins ARM repeat ARM repeat
e6qdvU1 U:19-415 Repetitive alpha hairpins ARM repeat ARM repeat
e6qdvU3 U:416-492,U:660-706,U:795-1134 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6qdvU4 U:493-659 cradle loop barrel RIFT-related Alanine racemase-C
e6qdvU5 U:707-753,U:773-794 Spliceosomal helicase Aquarius insert domain Spliceosomal helicase Aquarius insert domain Spliceosomal helicase Aquarius insert domain
e6qdvU2 U:1135-1381 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6qdvW1 W:2-163 Single-stranded right-handed beta-helix Leucine-rich repeats Leucine-rich repeats
e6qdvY1 Y:3-94 Alpha-beta plaits RNA-binding domain, RBD RNA-binding domain, RBD