Domain ID e6r6gv1

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  • A: a+b two layers
  • X: dsRBD-like
  • H: dsRNA-binding domain-like
  • T: dsRNA-binding domain-like
  • F: Ribosomal_S5
UID: 002512252
Type: Automatic domain
Parent: e4v6iAE2
Range: v:135-201
PDB: 6r6g
PDB Description: uS5
Hsap BLAST neighbor: P15880
Species: Oryctolagus cuniculus

Structure of domain e6r6gv1

Domains in the same chain:

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e6r6gv2 v:58-134 N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p)
e6r6gv1 v:135-201 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e6r6gv3 v:202-278 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like

Domains in the same PDB:

e6r6g01 0:83-150 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6r6g61 6:2-314 beta-propeller-like beta-propeller 7-bladed
e6r6g91 9:2-56 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e6r6ga1 a:2-148 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e6r6gA2 A:2-96 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6r6gA1 A:97-249 SH3 SH3 SH3
e6r6gAA1 AA:78-132 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e)
e6r6gAB2 AB:4-89 Domain of the SRP/SRP receptor G proteins-like Domain of the SRP/SRP receptor G-proteins Domain of the SRP/SRP receptor G-proteins
e6r6gAB1 AB:326-434 HTH HTH tri-helical
e6r6gAB3 AB:90-296 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6r6gAC1 AC:13-117 HTH HTH Putative DNA-binding domain
e6r6gAD1 AD:2-75 SRP9/14-like Signal recognition particle alu RNA binding heterodimer SRP9/14-related Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e6r6gAE1 AE:2-95 SRP9/14-like Signal recognition particle alu RNA binding heterodimer SRP9/14-related Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e6r6gAI1 AI:50-244 Repetitive alpha hairpins ARM repeat ARM repeat
e6r6gb1 b:2-117 RPL29 RPL29 RPL29
e6r6gB1 B:2-395 cradle loop barrel RIFT-related Alanine racemase-C
e6r6gBB1 BB:6-107 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e6r6gBB2 BB:108-194 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e6r6gc1 c:10-107 Bacillus chorismate mutase-like L30e-like L30e-like
e6r6gC2 C:2-272 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e6r6gC1 C:273-363 C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p)
e6r6gCC1 CC:2-207 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e6r6gd1 d:18-124 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e6r6gD1 D:3-295 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e6r6gDD1 DD:2-186 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e6r6ge1 e:2-129 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e6r6gE1 E:41-291 SH3 SH3 SH3
e6r6gEE1 EE:3-153 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6r6gf1 f:2-110 cradle loop barrel RIFT-related Alanine racemase-C
e6r6gF1 F:23-247 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e6r6gFF1 FF:7-68 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6r6gg1 g:2-115 Glucocorticoid receptor-like RPL34 RPL34
e6r6gG1 G:80-319 Bacillus chorismate mutase-like L30e-like L30e-like
e6r6gGG1 GG:18-117 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e6r6gh1 h:2-123 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e6r6gH1 H:1-87 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e6r6gH2 H:88-190 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e6r6gHH1 HH:1-83 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e)
e6r6gi1 i:2-103 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e)
e6r6gI1 I:2-214 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e6r6gII1 II:2-145 HhH/H2TH H2TH H2TH
e6r6gj1 j:2-87 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6r6gJ1 J:8-107,J:127-177 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e6r6gJJ1 JJ:2-84 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6r6gk1 k:2-70 SRP9/14-like Signal recognition particle alu RNA binding heterodimer SRP9/14-related Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e6r6gKK1 KK:2-133 HTH HTH FF domain
e6r6gl1 l:2-51 Ribosomal protein L39e Ribosomal protein L39e Ribosomal protein L39e
e6r6gL1 L:2-211 RPL13 RPL13 RPL13
e6r6gLL1 LL:2-102 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e6r6gm1 m:51-102 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6r6gM1 M:2-139 SH3 SH3 SH3
e6r6gMM1 MM:16-151 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e6r6gn1 n:1-25 Ribosomal protein L41-A Ribosomal protein L41-A Ribosomal protein L41-A
e6r6gN1 N:2-204 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e6r6gNN1 NN:4-127 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e6r6go1 o:2-105 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6r6gO1 O:5-203 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e6r6gOO1 OO:41-115 HTH HTH winged
e6r6gp1 p:2-92 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6r6gP1 P:2-154 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e6r6gPP1 PP:3-143 HTH HTH winged
e6r6gq1 q:2-218 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e6r6gQ1 Q:2-188 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e6r6gQQ2 QQ:2-82 HTH 40S ribosomal protein S13 N-terminal domain 40S ribosomal protein S13 N-terminal domain
e6r6gQQ1 QQ:83-150 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e6r6gr1 r:2-125 RPL28 RPL28 RPL28
e6r6gR1 R:2-56 Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain
e6r6gR2 R:57-181 Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain
e6r6gRR1 RR:14-130 Bacillus chorismate mutase-like L30e-like L30e-like
e6r6gs2 s:5-109,s:183-200 Alpha-beta plaits Ribosomal protein L10-like Ribosomal protein L10-like
e6r6gs1 s:110-182 Insertion domain in 60S ribosomal protein rpP0 (L10P) Insertion domain in 60S ribosomal protein rpP0 (L10P) Insertion domain in 60S ribosomal protein rpP0 (L10P)
e6r6gS2 S:1-72 GP2-like RplX-like RplX-like
e6r6gS1 S:73-176 GP2-like RplX-like RplX-like
e6r6gSS1 SS:1-96 HTH HTH winged
e6r6gt2 t:9-73 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e6r6gt1 t:74-161 HTH HTH Ribosomal protein L11, C-terminal domain
e6r6gT1 T:2-160 SH3 SH3 SH3
e6r6gTT2 TT:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e6r6gTT1 TT:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e6r6gu2 u:21-113 Ribosomal protein L25-like 40S ribosomal protein S3A N-terminal domain 40S ribosomal protein S3A N-terminal domain
e6r6gu1 u:114-233 T-fold 40S ribosomal protein S3A C-terminal domain 40S ribosomal protein S3A C-terminal domain
e6r6gU1 U:17-115 Ribosomal protein L22e Ribosomal protein L22e Ribosomal protein L22e
e6r6gUU1 UU:5-146 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6r6gv2 v:58-134 N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p)
e6r6gv1 v:135-201 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e6r6gv3 v:202-278 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6r6gV1 V:10-140 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e6r6gVV1 VV:2-142 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6r6gw1 w:1-99 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e6r6gw2 w:92-228 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e6r6gW1 W:1-121 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e6r6gWW1 WW:12-131 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e6r6gx2 x:2-116 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e6r6gx3 x:117-175 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6r6gx1 x:176-263 SH3 SH3 SH3
e6r6gX1 X:39-156 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e6r6gy1 y:14-204 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e6r6gY1 Y:1-134 SH3 SH3 SH3
e6r6gz1 z:1-237 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e6r6gZ1 Z:2-136 SH3 SH3 SH3