Domain ID e6rqhE1

Download files:
  • A: a+b two layers
  • X: RPB5-like RNA polymerase subunit
  • H: RPB5-like RNA polymerase subunit
  • T: RPB5-like RNA polymerase subunit
  • F: RNA_pol_Rpb5_C
UID: 002557412
Type: Automatic domain
Parent: e1dzfA1
Range: E:144-215
PDB: 6rqh
PDB Description: DNA-directed RNA polymerases I, II, and III subunit RPABC1
UniProt: P20434
Species:

Structure of domain e6rqhE1

Domains in the same chain:

Download Pymol

e6rqhE2 E:1-143 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e6rqhE1 E:144-215 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit

Domains in the same PDB:

e6rqhA9 A:3-141,A:172-270,A:309-463 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e6rqhA3 A:464-505,A:581-665 cradle loop barrel RIFT-related double psi
e6rqhA5 A:506-580 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6rqhA4 A:666-826 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e6rqhA8 A:827-1053 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e6rqhA2 A:1054-1180 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase I RPA190 subunit third helical domain in yeast RNA-polymerase I RPA190 subunit
e6rqhA6 A:1181-1234,A:1545-1663 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e6rqhA1 A:1235-1261,A:1498-1544 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6rqhA7 A:1262-1396,A:1434-1497 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6rqhB7 B:12-209,B:401-547 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6rqhB6 B:210-400 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e6rqhB1 B:548-646 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e6rqhB2 B:647-761 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e6rqhB3 B:762-798,B:912-1040 cradle loop barrel RIFT-related double psi
e6rqhB5 B:799-911 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6rqhB4 B:1041-1203 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6rqhC1 C:30-75,C:222-335 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6rqhC2 C:76-221 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e6rqhD1 D:1-49,D:80-100 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e6rqhE2 E:1-143 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e6rqhE1 E:144-215 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e6rqhF1 F:55-154 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e6rqhG2 G:8-126 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e6rqhG1 G:127-171,G:215-251 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6rqhH1 H:3-146 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6rqhI1 I:2-67 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6rqhI2 I:68-125 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6rqhJ1 J:1-69 HTH RPB10 RPB10
e6rqhK1 K:40-142 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6rqhL1 L:26-70 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6rqhM1 M:8-114 triple barrel triple barrel RNA polymerase I subunits A49/A34.5 dimerization domains
e6rqhN1 N:23-180 triple barrel triple barrel RNA polymerase I subunits A49/A34.5 dimerization domains
e6rqhO1 O:48-248,O:325-551,O:581-614 Repetitive alpha hairpins ARM repeat ARM repeat