ECOD: domain e6ruiJ1

Domain ID e6ruiJ1

A: alpha arrays
X: HTH
H: RPB10
T: RPB10
F: RNA_pol_N

UID:	002559254
Type:	Automatic domain
Parent:	e1twfJ1
Range:	J:1-69
PDB:	6rui
PDB Description:	DNA-directed RNA polymerases I, II, and III subunit RPABC5
UniProt:	P22139
Species:

Domains in the same chain:

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e6ruiJ1	J:1-69	HTH	RPB10	RPB10

Domains in the same PDB:

e6ruiA3	A:1-141,A:172-270,A:312-463	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit
e6ruiA2	A:464-505,A:581-665	cradle loop barrel	RIFT-related	double psi
e6ruiA7	A:506-580	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6ruiA9	A:666-826	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit
e6ruiA1	A:827-1053	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit
e6ruiA6	A:1054-1180	helical domain in yeast RNA-polymerases	third helical domain in yeast RNA-polymerase I RPA190 subunit	third helical domain in yeast RNA-polymerase I RPA190 subunit
e6ruiA8	A:1181-1234,A:1545-1663	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit
e6ruiA5	A:1235-1261,A:1498-1544	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6ruiA4	A:1262-1338,A:1438-1497	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6ruiB2	B:12-209,B:401-547	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6ruiB5	B:210-400	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase
e6ruiB3	B:548-646	inserted a+b domain in yeast RNA polymerase beta subunit	inserted a+b domain in yeast RNA polymerase beta subunit	inserted a+b domain in yeast RNA polymerase beta subunit
e6ruiB1	B:647-761	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase
e6ruiB4	B:762-798,B:912-1040	cradle loop barrel	RIFT-related	double psi
e6ruiB6	B:799-911	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6ruiB7	B:1041-1203	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6ruiC2	C:30-75,C:222-335	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e6ruiC1	C:76-221	Ribosomal protein TL5/L25 C-terminal domain-like	Insert subdomain of RNA polymerase alpha subunit	Insert subdomain of RNA polymerase alpha subunit
e6ruiD1	D:1-49,D:80-100	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e6ruiE2	E:1-143	Restriction endonuclease-like	Eukaryotic RPB5 N-terminal domain	Eukaryotic RPB5 N-terminal domain
e6ruiE1	E:144-215	RPB5-like RNA polymerase subunit	RPB5-like RNA polymerase subunit	RPB5-like RNA polymerase subunit
e6ruiF1	F:55-154	RPB6/omega subunit-like	RPB6/omega subunit-like	RPB6
e6ruiG2	G:8-126	Dodecin subunit-like	Flavin-binding protein dodecin-like	Flavin-binding protein dodecin-like
e6ruiG1	G:127-174,G:215-251	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6ruiH1	H:3-146	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6ruiI2	I:2-67	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6ruiI1	I:68-125	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6ruiJ1	J:1-69	HTH	RPB10	RPB10
e6ruiK1	K:40-142	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e6ruiL1	L:26-70	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6ruiM1	M:8-115	triple barrel	triple barrel	RNA polymerase I subunits A49/A34.5 dimerization domains
e6ruiN1	N:23-180	triple barrel	triple barrel	RNA polymerase I subunits A49/A34.5 dimerization domains
e6ruiO1	O:48-252,O:322-551,O:581-614	Repetitive alpha hairpins	ARM repeat	ARM repeat