Domain ID e6skgBp3

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  • A: alpha arrays
  • X: RuvA-C
  • H: Hypothetical protein AF0491, middle domain
  • T: Hypothetical protein AF0491, middle domain
  • F: SBDS_domain_II
UID: 002642989
Type: Automatic domain
Parent: e1t95A1
Range: Bp:87-161
PDB: 6skg
PDB Description: Predicted exosome subunit, UPF0023 family
Species:

Structure of domain e6skgBp3

Domains in the same chain:

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e6skgBp3 Bp:87-161 RuvA-C Hypothetical protein AF0491, middle domain Hypothetical protein AF0491, middle domain
e6skgBp2 Bp:4-86 FYSH domain FYSH domain FYSH domain
e6skgBp1 Bp:162-235 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like

Domains in the same PDB:

e6skgAb1 Ab:3-198 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e6skgAc2 Ac:86-196 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e6skgAc1 Ac:2-93 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e6skgAd1 Ad:9-99 Ribosomal protein L25-like 40S ribosomal protein S3A N-terminal domain 40S ribosomal protein S3A N-terminal domain
e6skgAd2 Ad:100-198 T-fold 40S ribosomal protein S3A C-terminal domain 40S ribosomal protein S3A C-terminal domain
e6skgAe1 Ae:2-175 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e6skgAf1 Af:180-243 SH3 SH3 SH3
e6skgAf2 Af:118-179 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6skgAf3 Af:2-117 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e6skgAh1 Ah:3-125 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e6skgAi1 Ai:2-75,Ai:96-215 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e6skgAj1 Aj:64-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e6skgAj2 Aj:2-63 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e6skgAk1 Ak:2-126 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e6skgAl1 Al:2-134 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6skgAm1 Am:2-101 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e6skgAn1 An:14-140 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e6skgAo1 Ao:3-145 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6skgAp1 Ap:4-138 HhH/H2TH H2TH H2TH
e6skgAq2 Aq:83-150 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e6skgAq1 Aq:2-82 HTH 40S ribosomal protein S13 N-terminal domain 40S ribosomal protein S13 N-terminal domain
e6skgAr1 Ar:3-56 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e6skgAs1 As:2-109 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6skgAt1 At:2-65 HTH HTH FF domain
e6skgAu1 Au:6-121 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e6skgAv1 Av:2-150 HTH HTH winged
e6skgAw1 Aw:1-95 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e6skgAx1 Ax:4-64 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6skgAy1 Ay:3-66 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6skgAz1 Az:8-62 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6skgBa1 Ba:2-155 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e6skgBb1 Bb:3-98 Bacillus chorismate mutase-like L30e-like L30e-like
e6skgBc1 Bc:2-90 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e6skgBC2 BC:2-92 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6skgBC1 BC:93-238 SH3 SH3 SH3
e6skgBd1 Bd:2-125 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e6skgBD1 BD:3-346 cradle loop barrel RIFT-related Alanine racemase-C
e6skgBe1 Be:1-89 Glucocorticoid receptor-like RPL34 RPL34
e6skgBE1 BE:1-255 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e6skgBf1 Bf:16-101 cradle loop barrel RIFT-related Alanine racemase-C
e6skgBF1 BF:4-113,BF:134-180 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e6skgBg1 Bg:2-85 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6skgBG2 BG:2-85 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e6skgBG1 BG:86-184 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e6skgBh1 Bh:2-63 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6skgBH1 BH:3-123 Bacillus chorismate mutase-like L30e-like L30e-like
e6skgBi1 Bi:2-51 Ribosomal protein L39e Ribosomal protein L39e Ribosomal protein L39e
e6skgBI1 BI:3-123 Bacillus chorismate mutase-like L30e-like L30e-like
e6skgBj1 Bj:2-48 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6skgBJ1 BJ:3-180 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e6skgBk1 Bk:1-36 Ribosomal protein L41-A Ribosomal protein L41-A Ribosomal protein L41-A
e6skgBK1 BK:1-142 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e6skgBl1 Bl:1-93 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6skgBL1 BL:2-141 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e6skgBm1 Bm:3-65 HTH HTH FF domain
e6skgBM1 BM:2-82 SH3 SH3 SH3
e6skgBn1 Bn:1-92 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e6skgBN1 BN:2-82 SH3 SH3 SH3
e6skgBo1 Bo:3-45 beta-beta-alpha zinc fingers beta-beta-alpha zinc fingers beta-beta-alpha zinc fingers
e6skgBO1 BO:1-148 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e6skgBp2 Bp:4-86 FYSH domain FYSH domain FYSH domain
e6skgBp1 Bp:162-235 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e6skgBp3 Bp:87-161 RuvA-C Hypothetical protein AF0491, middle domain Hypothetical protein AF0491, middle domain
e6skgBP1 BP:2-194 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e6skgBQ1 BQ:2-155,BQ:180-197 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e6skgBR1 BR:2-121 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e6skgBS1 BS:55-148 Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain
e6skgBS2 BS:3-54 Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain
e6skgBT1 BT:2-75 GP2-like RplX-like RplX-like
e6skgBU1 BU:2-97 SH3 SH3 SH3
e6skgBV1 BV:2-155 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e6skgBW1 BW:1-85 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e6skgBX1 BX:1-120 SH3 SH3 SH3
e6skgBY1 BY:2-63 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e6skgBZ1 BZ:1-64 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)