Domain ID e6tqoY4

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  • A: a+b complex topology
  • X: first helical domain in RNA-polymerase beta-prime subunit
  • H: first helical domain in RNA-polymerase beta-prime subunit
  • T: first helical domain in RNA-polymerase beta-prime subunit
  • F: RNA_pol_Rpb1_3
UID: 002651793
Type: Automatic domain
Parent: e1twfA6
Range: Y:499-638
PDB: 6tqo
PDB Description: DNA-directed RNA polymerase subunit beta'
Species:

Structure of domain e6tqoY4

Domains in the same chain:

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e6tqoY6 Y:16-341 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e6tqoY7 Y:334-498 cradle loop barrel RIFT-related double psi
e6tqoY4 Y:499-638 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e6tqoY3 Y:639-810 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e6tqoY8 Y:811-894 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6tqoY9 Y:895-931,Y:1214-1375 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e6tqoY1 Y:932-1022 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6tqoY2 Y:1023-1131 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6tqoY5 Y:1132-1215 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif

Domains in the same PDB:

e6tqoA2 A:1-127 Transcription factor NusA, N-terminal domain Transcription factor NusA, N-terminal domain Transcription factor NusA, N-terminal domain
e6tqoA1 A:126-199 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6tqoA3 A:199-278 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e6tqoA4 A:279-346 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e6tqoA6 A:345-422 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e6tqoA5 A:423-495 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e6tqoB1 B:4-137 NusB-like NusB-like NusB-like
e6tqoC1 C:2-206 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e6tqoE1 E:2-103 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e6tqoG1 G:4-46,G:67-123 Alpha-beta plaits N-utilization substance G protein NusG, N-terminal domain N-utilization substance G protein NusG, N-terminal domain
e6tqoG2 G:123-181 SH3 SH3 SH3
e6tqoS2 S:0-141 a+b domain in carbohydrate phosphatases a+b domain in carbohydrate phosphatases a+b domain in carbohydrate phosphatases
e6tqoS1 S:142-266 Rossmann-like domain in carbohydrate phosphatases Rossmann-like domain in carbohydrate phosphatases Rossmann-like domain in carbohydrate phosphatases
e6tqoT2 T:1-141 a+b domain in carbohydrate phosphatases a+b domain in carbohydrate phosphatases a+b domain in carbohydrate phosphatases
e6tqoT1 T:142-263 Rossmann-like domain in carbohydrate phosphatases Rossmann-like domain in carbohydrate phosphatases Rossmann-like domain in carbohydrate phosphatases
e6tqoU1 U:4-52,U:179-236 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6tqoU3 U:53-178 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e6tqoU2 U:237-325 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e6tqoV2 V:5-52,V:179-234 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6tqoV1 V:53-178 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e6tqoW1 W:2-91 RPB6/omega subunit-like RPB6/omega subunit-like RNA polymerase omega subunit
e6tqoX9 X:1-151,X:452-577 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6tqoX6 X:152-225,X:343-451 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e6tqoX7 X:226-234,X:289-342 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6tqoX10 X:235-288 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6tqoX1 X:578-712 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e6tqoX4 X:713-790 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6tqoX8 X:791-827,X:1063-1239 cradle loop barrel RIFT-related double psi
e6tqoX3 X:828-938,X:1045-1062 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6tqoX2 X:939-1044 Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit
e6tqoX5 X:1240-1342 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6tqoY6 Y:16-341 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e6tqoY7 Y:334-498 cradle loop barrel RIFT-related double psi
e6tqoY4 Y:499-638 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e6tqoY3 Y:639-810 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e6tqoY8 Y:811-894 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6tqoY9 Y:895-931,Y:1214-1375 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e6tqoY1 Y:932-1022 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6tqoY2 Y:1023-1131 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6tqoY5 Y:1132-1215 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif