Domain ID e6wmuF1

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  • A: alpha complex topology
  • X: Sigma2 domain-like
  • H: Sigma2 domain of RNA polymerase sigma factors
  • T: Sigma2 domain of RNA polymerase sigma factors
  • F: Sigma70_r1_2,Sigma70_r2,Sigma70_ner
UID: 002715086
Type: Automatic domain
Parent: e4ljzL1
Range: F:91-167,F:213-448
PDB: 6wmu
PDB Description: RNA polymerase sigma factor RpoD
Species:

Structure of domain e6wmuF1

Domains in the same chain:

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e6wmuF1 F:91-167,F:213-448 Sigma2 domain-like Sigma2 domain of RNA polymerase sigma factors Sigma2 domain of RNA polymerase sigma factors
e6wmuF3 F:449-509 HTH HTH tri-helical
e6wmuF2 F:510-612 HTH HTH tri-helical

Domains in the same PDB:

e6wmuA2 A:7-52,A:174-236 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6wmuA1 A:53-173 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e6wmuB1 B:6-52,B:174-233 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6wmuB2 B:53-173 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e6wmuC5 C:3-152,C:450-577 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6wmuC3 C:153-226,C:343-451 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e6wmuC8 C:227-234,C:289-342 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6wmuC1 C:235-288 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6wmuC2 C:578-714 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e6wmuC7 C:713-790 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6wmuC9 C:791-828,C:1058-1237 cradle loop barrel RIFT-related double psi
e6wmuC4 C:828-938 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6wmuC6 C:939-1057 Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit
e6wmuC10 C:1238-1341 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6wmuD2 D:3-341 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e6wmuD9 D:334-498 cradle loop barrel RIFT-related double psi
e6wmuD7 D:499-638 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e6wmuD5 D:639-810 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e6wmuD1 D:811-894 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6wmuD3 D:895-931,D:1214-1376 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e6wmuD6 D:932-1022 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6wmuD4 D:1023-1132 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6wmuD8 D:1133-1215 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6wmuE1 E:2-88 RPB6/omega subunit-like RPB6/omega subunit-like RNA polymerase omega subunit
e6wmuF1 F:91-167,F:213-448 Sigma2 domain-like Sigma2 domain of RNA polymerase sigma factors Sigma2 domain of RNA polymerase sigma factors
e6wmuF3 F:449-509 HTH HTH tri-helical
e6wmuF2 F:510-612 HTH HTH tri-helical
e6wmuK1 K:10-86 Thioredoxin-like Thioredoxin-like Thioredoxin-like
e6wmuK2 K:85-208 Repetitive alpha hairpins Glutathione S-transferase (GST)-C Glutathione S-transferase (GST)-C
e6wmuL1 L:6-86 Thioredoxin-like Thioredoxin-like Thioredoxin-like
e6wmuL2 L:85-209 Repetitive alpha hairpins Glutathione S-transferase (GST)-C Glutathione S-transferase (GST)-C