ECOD: domain e6woyD9

Domain ID e6woyD9

A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: double psi
F: RNA_pol_Rpb1_2

UID:	002639946
Type:	Automatic domain
Parent:	e1twfA1
Range:	D:622-653,D:697-777
Ligands:	CH1 MG
PDB:	6woy
PDB Description:	DNA-directed RNA polymerase subunit beta'
Species:

Domains in the same chain:

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e6woyD7	D:3-165,D:448-621	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit
e6woyD2	D:166-208,D:389-395	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6woyD3	D:209-216,D:341-388	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6woyD11	D:217-340	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Duplicated hybrid motif
e6woyD10	D:396-447	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6woyD9	D:622-653,D:697-777	cradle loop barrel	RIFT-related	double psi
e6woyD1	D:654-696	inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit	inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit	inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit
e6woyD8	D:778-948	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit
e6woyD4	D:949-1109	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit
e6woyD12	D:1110-1200	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6woyD5	D:1201-1269,D:1331-1502	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit
e6woyD6	D:1270-1330	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif

Domains in the same PDB:

e6woyA2	A:4-49,A:173-229	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e6woyA1	A:50-172	Ribosomal protein TL5/L25 C-terminal domain-like	Insert subdomain of RNA polymerase alpha subunit	Insert subdomain of RNA polymerase alpha subunit
e6woyB1	B:6-49,B:173-229	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e6woyB2	B:50-172	Ribosomal protein TL5/L25 C-terminal domain-like	Insert subdomain of RNA polymerase alpha subunit	Insert subdomain of RNA polymerase alpha subunit
e6woyC1	C:1-134,C:324-450	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6woyC2	C:135-323	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase
e6woyC6	C:451-584	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase
e6woyC5	C:585-659	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6woyC3	C:660-700,C:827-999	cradle loop barrel	RIFT-related	double psi
e6woyC7	C:699-832	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6woyC4	C:992-1118	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6woyD7	D:3-165,D:448-621	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit
e6woyD2	D:166-208,D:389-395	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6woyD3	D:209-216,D:341-388	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6woyD11	D:217-340	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Duplicated hybrid motif
e6woyD10	D:396-447	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6woyD9	D:622-653,D:697-777	cradle loop barrel	RIFT-related	double psi
e6woyD1	D:654-696	inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit	inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit	inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit
e6woyD8	D:778-948	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit
e6woyD4	D:949-1109	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit
e6woyD12	D:1110-1200	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6woyD5	D:1201-1269,D:1331-1502	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit
e6woyD6	D:1270-1330	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6woyE1	E:2-95	RPB6/omega subunit-like	RPB6/omega subunit-like	RNA polymerase omega subunit
e6woyF1	F:78-257	Sigma2 domain-like	Sigma2 domain of RNA polymerase sigma factors	Sigma2 domain of RNA polymerase sigma factors
e6woyF3	F:258-317	HTH	HTH	tri-helical
e6woyF2	F:318-423	HTH	HTH	tri-helical