ECOD: domain e6xu6Cm1

Domain ID e6xu6Cm1

A: few secondary structure elements
X: Rubredoxin-like
H: Rubredoxin-related
T: Rubredoxin-related
F: Ribosomal_L40e

UID:	002770605
Type:	Automatic domain
Parent:	e4v7eCm1
Range:	Cm:77-128
PDB:	6xu6
PDB Description:	Ubiquitin-60S ribosomal protein L40
Species:

Domains in the same chain:

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e6xu6Cm1	Cm:77-128	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related

Domains in the same PDB:

e6xu6Aa1	Aa:2-108	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e6xu6AA1	AA:6-223	Flavodoxin-like	Ribosomal protein S2/SIS domain	Ribosomal protein S2/SIS domain
e6xu6Ab1	Ab:1-84	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6xu6AB1	AB:117-236	T-fold	40S ribosomal protein S3A C-terminal domain	40S ribosomal protein S3A C-terminal domain
e6xu6AB2	AB:17-116	Ribosomal protein L25-like	40S ribosomal protein S3A N-terminal domain	40S ribosomal protein S3A N-terminal domain
e6xu6Ac1	Ac:4-65	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6xu6AC3	AC:118-184	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e6xu6AC1	AC:38-117	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)
e6xu6AC2	AC:185-264	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e6xu6Ad1	Ad:5-56	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e6xu6AD1	AD:94-229	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e6xu6AD2	AD:3-101	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e6xu6Ae1	Ae:74-131	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)
e6xu6AE1	AE:117-175	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6xu6AE2	AE:176-261	SH3	SH3	SH3
e6xu6AE3	AE:1-116	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e6xu6Af1	Af:77-156	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6xu6AF1	AF:40-228	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e6xu6Ag1	Ag:1-318	beta-propeller-like	beta-propeller	8-bladed
e6xu6AG1	AG:1-231	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein L25-like
e6xu6AH1	AH:1-107	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e6xu6AH2	AH:108-194	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e6xu6AI1	AI:2-208	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e6xu6AJ1	AJ:4-184	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e6xu6AK1	AK:1-90	HTH	HTH	winged
e6xu6AL1	AL:1-155	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6xu6AM1	AM:21-139	Bacillus chorismate mutase-like	L30e-like	L30e-like
e6xu6AN2	AN:83-151	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e6xu6AN1	AN:2-82	HTH	40S ribosomal protein S13 N-terminal domain	40S ribosomal protein S13 N-terminal domain
e6xu6AO1	AO:25-151	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e6xu6AP1	AP:8-131	Ribosomal protein S19	Ribosomal protein S19	Ribosomal protein S19
e6xu6AQ1	AQ:1-148	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e6xu6AR1	AR:1-120	HTH	HTH	FF domain
e6xu6AS1	AS:8-78,AS:99-141	HhH/H2TH	H2TH	H2TH
e6xu6AT1	AT:6-148	HTH	HTH	winged
e6xu6AU1	AU:18-119	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e6xu6AV1	AV:1-82	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)
e6xu6AW1	AW:68-130	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e6xu6AW2	AW:2-67	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e6xu6AX1	AX:1-143	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6xu6AY1	AY:4-129	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e6xu6AZ1	AZ:40-113	HTH	HTH	winged
e6xu6Ca1	Ca:1-149	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e6xu6CA1	CA:99-253	SH3	SH3	SH3
e6xu6CA2	CA:1-98	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6xu6Cb1	Cb:2-76	RPL29	RPL29	RPL29
e6xu6CB1	CB:1-414	cradle loop barrel	RIFT-related	Alanine racemase-C
e6xu6Cc1	Cc:10-109	Bacillus chorismate mutase-like	L30e-like	L30e-like
e6xu6CC1	CC:2-300	Ribosomal protein L4	Ribosomal protein L4	Ribosomal protein L4
e6xu6CC2	CC:301-393	C-terminal helical region in 60S ribosomal protein L4 (L4p)	C-terminal helical region in 60S ribosomal protein L4 (L4p)	C-terminal helical region in 60S ribosomal protein L4 (L4p)
e6xu6Cd1	Cd:15-122	Ribosomal protein L31e-like	Ribosomal protein L31e/gp120 outer domain	Ribosomal protein L31e/gp120 outer domain
e6xu6CD1	CD:8-297	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e6xu6Ce1	Ce:1-132	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L32e	Ribosomal protein L32e
e6xu6CE1	CE:16-243	SH3	SH3	SH3
e6xu6Cf1	Cf:1-157	cradle loop barrel	RIFT-related	Alanine racemase-C
e6xu6CF1	CF:30-252	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e
e6xu6Cg1	Cg:2-104	Glucocorticoid receptor-like	RPL34	RPL34
e6xu6CG1	CG:31-271	Bacillus chorismate mutase-like	L30e-like	L30e-like
e6xu6Ch1	Ch:1-123	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)
e6xu6CH1	CH:86-190	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e6xu6CH2	CH:1-85	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e6xu6Ci1	Ci:1-113	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)
e6xu6CI1	CI:2-218	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal protein L10e
e6xu6Cj1	Cj:2-88	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6xu6CJ1	CJ:1-112,CJ:132-182	Ribosomal protein L5	Ribosomal protein L5	Ribosomal protein L5
e6xu6Ck1	Ck:1-70	SRP9/14-like	Signal recognition particle alu RNA binding heterodimer SRP9/14-related	Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e6xu6Cl1	Cl:2-51	Ribosomal protein L39e	Ribosomal protein L39e	Ribosomal protein L39e
e6xu6CL1	CL:2-211	RPL13	RPL13	RPL13
e6xu6Cm1	Cm:77-128	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6xu6CM1	CM:1-135	SH3	SH3	SH3
e6xu6Cn1	Cn:1-25	Ribosomal protein L41-A	Ribosomal protein L41-A	Ribosomal protein L41-A
e6xu6CN1	CN:2-204	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e6xu6Co1	Co:1-104	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6xu6CO1	CO:1-205	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L13 and L16-A	Ribosomal protein L13 and L16-A
e6xu6Cp1	Cp:2-92	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6xu6CP1	CP:2-186	Enolase-N/ribosomal protein	Ribosomal protein L22	Ribosomal protein L22
e6xu6CQ1	CQ:2-188	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e6xu6Cr1	Cr:2-135	RPL28	RPL28	RPL28
e6xu6CR2	CR:1-56	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain
e6xu6CR1	CR:57-203	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain
e6xu6CS2	CS:73-177	GP2-like	RplX-like	RplX-like
e6xu6CS1	CS:5-72	GP2-like	RplX-like	RplX-like
e6xu6CT1	CT:2-159	SH3	SH3	SH3
e6xu6CU1	CU:194-289	Ribosomal protein L22e	Ribosomal protein L22e	Ribosomal protein L22e
e6xu6CV1	CV:7-140	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e6xu6CW1	CW:2-59	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e6xu6CX1	CX:158-277	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e6xu6CY1	CY:2-132	SH3	SH3	SH3
e6xu6Cz2	Cz:58-153	Flavodoxin-like	Rossmann-like domain in Ribosomal protein L1	Rossmann-like domain in Ribosomal protein L1
e6xu6Cz1	Cz:1-57,Cz:154-217	a+b domain in Ribosomal protein L1	a+b domain in Ribosomal protein L1	a+b domain in Ribosomal protein L1
e6xu6CZ1	CZ:2-135	SH3	SH3	SH3
e6xu6DA1	DA:49-375	Repetitive alpha hairpins	ARM repeat	ARM repeat