Domain ID e6ydwB11

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  • A: few secondary structure elements
  • X: Ribosomal protein bL28-related
  • H: Ribosomal protein bL28-related
  • T: Mitoribosomal protein bL28m
  • F: Ribosomal_L28
UID: 002641554
Type: Automatic domain
Parent: e4v1911
Range: B1:2-245
PDB: 6ydw
PDB Description: Mitochondrial ribosomal protein L28
Species:

Structure of domain e6ydwB11

Domains in the same chain:

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e6ydwB11 B1:2-245 Ribosomal protein bL28-related Ribosomal protein bL28-related Mitoribosomal protein bL28m

Domains in the same PDB:

e6ydwAa1 Aa:88-379 Mitoribosomal protein mS22 Mitoribosomal protein mS22 Mitoribosomal protein mS22
e6ydwAb1 Ab:2-136 RuvA-C Mitoribosomal protein mS23 Mitoribosomal protein mS23
e6ydwAB1 AB:55-274 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e6ydwAc1 Ac:2-170 Thioredoxin-like Thioredoxin-like Thioredoxin-like
e6ydwAC1 AC:36-167 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e6ydwAd1 Ad:27-203 Mitoribosomal protein mS26 Mitoribosomal protein mS26 Mitoribosomal protein mS26
e6ydwAe1 Ae:68-334,Ae:356-455 Repetitive alpha hairpins ARM repeat ARM repeat
e6ydwAE1 AE:216-286 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e6ydwAE2 AE:287-430 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6ydwAE3 AE:88-215 N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p)
e6ydwAf1 Af:78-176 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6ydwAF1 AF:2-123 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e6ydwAg1 Ag:45-345 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6ydwAg2 Ag:346-397 Histone-like Histone-related AAA+ ATPase lid domain
e6ydwAG1 AG:35-242 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e6ydwAh1 Ah:268-387 Mitoribosomal protein mS31 Mitoribosomal protein mS31 Mitoribosomal protein mS31
e6ydwAi1 Ai:4-102 Mitoribosomal protein mS33 Mitoribosomal protein mS33 Mitoribosomal protein mS33
e6ydwAI1 AI:70-397 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6ydwAj1 Aj:1-213 SH3 Mitoribosomal protein mS34 Mitoribosomal protein mS34
e6ydwAJ1 AJ:50-189 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e6ydwAk1 Ak:51-325 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like
e6ydwAK1 AK:60-196 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e6ydwAL1 AL:31-139 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6ydwAm1 Am:2-117 p8-MTCP1-related p8-MTCP1-related p8-MTCP1-related
e6ydwAn1 An:128-199 Mitoribosomal protein mS38 Mitoribosomal protein mS38 Mitoribosomal protein mS38
e6ydwAN1 AN:28-128 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e6ydwAO1 AO:65-239 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e6ydwAp1 Ap:49-238 HTH HTH tri-helical
e6ydwAP1 AP:10-126 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e6ydwAQ1 AQ:2-113 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6ydwAR1 AR:47-143 HTH HTH tri-helical
e6ydwAU1 AU:2-87 30S ribosomal protein S21 30S ribosomal protein S21 30S ribosomal protein S21
e6ydwB01 B0:39-148 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e6ydwB11 B1:2-245 Ribosomal protein bL28-related Ribosomal protein bL28-related Mitoribosomal protein bL28m
e6ydwB21 B2:65-243 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e6ydwB31 B3:35-152 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e6ydwB41 B4:35-96 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e6ydwB51 B5:79-188 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6ydwB61 B6:13-64 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6ydwB71 B7:50-95 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e6ydwB81 B8:94-188 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e6ydwB91 B9:63-100 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e6ydwBa1 Ba:30-422 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e6ydwBb1 Bb:27-380 Immunoglobulin-like beta-sandwich Immunoglobulin-related PEBP-like
e6ydwBc1 Bc:30-61,Bc:136-324 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain ThrRS/AlaRS editing domain
e6ydwBc2 Bc:62-135 beta-Grasp Ubiquitin-related Ubiquitin-like
e6ydwBC2 BC:446-524 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e6ydwBC5 BC:525-643 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6ydwBC3 BC:644-742 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e6ydwBC1 BC:320-445 cradle loop barrel RIFT-related Alanine racemase-C
e6ydwBC4 BC:40-321 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6ydwBd1 Bd:39-156 Mitochondrial 54S ribosomal protein L28 Mitochondrial 54S ribosomal protein L28 Mitochondrial 54S ribosomal protein L28
e6ydwBD1 BD:61-179 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6ydwBD2 BD:180-300 SH3 SH3 SH3
e6ydwBe1 Be:14-135 Mitochondrial 54S ribosomal protein L27 Mitochondrial 54S ribosomal protein L27 Mitochondrial 54S ribosomal protein L27
e6ydwBE1 BE:42-348 cradle loop barrel RIFT-related Alanine racemase-C
e6ydwBf1 Bf:35-142 Mitoribosomal protein mL42 Mitoribosomal protein mL42 Mitoribosomal protein mL42
e6ydwBF1 BF:45-273 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e6ydwBg1 Bg:2-149 Thioredoxin-like Thioredoxin-like Thioredoxin-like
e6ydwBh2 Bh:235-319 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e6ydwBh1 Bh:31-234 RNase III catalytic domain-like RNase III catalytic domain-like RNase III catalytic domain-like
e6ydwBi1 Bi:38-297 Cystatin-like NTF2-like NTF2-like
e6ydwBI1 BI:53-150 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e6ydwBj1 Bj:43-279 beta-Grasp Nudix Nudix
e6ydwBk1 Bk:48-212 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e6ydwBK1 BK:17-83 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e6ydwBK2 BK:83-192 HTH HTH Ribosomal protein L11, C-terminal domain
e6ydwBl1 Bl:34-166 Glucose permease domain IIB-like eIF1-like eIF1-like
e6ydwBm1 Bm:51-159 ACP-like Acyl-carrier protein (ACP) Acyl-carrier protein (ACP)
e6ydwBn1 Bn:32-128 Long alpha-hairpin Mitoribosomal protein mL51 Mitoribosomal protein mL51
e6ydwBN1 BN:2-178 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e6ydwBo1 Bo:23-119 Mitoribosomal protein mL52 Mitoribosomal protein mL52 Mitoribosomal protein mL52
e6ydwBO1 BO:31-145 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e6ydwBp1 Bp:2-98 Thioredoxin-like Thioredoxin-like Thioredoxin-like
e6ydwBP1 BP:9-296 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e6ydwBQ1 BQ:30-251 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e6ydwBR1 BR:9-161 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e6ydwBS1 BS:38-180 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e6ydwBt1 Bt:9-102 Mitoribosomal protein mL63 Mitoribosomal protein mL63 Mitoribosomal protein mL63
e6ydwBT1 BT:71-292 SH3 SH3 SH3
e6ydwBu1 Bu:38-195 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like
e6ydwBU1 BU:10-149 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e6ydwBv1 Bv:25-159 Mitochondrial 54S ribosomal protein L25 Mitochondrial 54S ribosomal protein L25 Mitochondrial 54S ribosomal protein L25
e6ydwBV1 BV:55-209 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e6ydwBw1 Bw:40-426 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e6ydwBW1 BW:45-210 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e6ydwBx1 Bx:35-196 HTH HTH tri-helical
e6ydwBX1 BX:2-150 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e6ydwBY1 BY:11-216 SH3 SH3 SH3
e6ydwCL1 CL:46-90 Ribosomal protein L7/12, oligomerisation (N-terminal) domain Ribosomal protein L7/12, oligomerisation (N-terminal) domain Ribosomal protein L7/12, oligomerisation (N-terminal) domain
e6ydwDL1 DL:64-90 Ribosomal protein L7/12, oligomerisation (N-terminal) domain Ribosomal protein L7/12, oligomerisation (N-terminal) domain Ribosomal protein L7/12, oligomerisation (N-terminal) domain
e6ydwEL1 EL:64-91 Ribosomal protein L7/12, oligomerisation (N-terminal) domain Ribosomal protein L7/12, oligomerisation (N-terminal) domain Ribosomal protein L7/12, oligomerisation (N-terminal) domain
e6ydwFL1 FL:64-90 Ribosomal protein L7/12, oligomerisation (N-terminal) domain Ribosomal protein L7/12, oligomerisation (N-terminal) domain Ribosomal protein L7/12, oligomerisation (N-terminal) domain
e6ydwGL1 GL:64-90 Ribosomal protein L7/12, oligomerisation (N-terminal) domain Ribosomal protein L7/12, oligomerisation (N-terminal) domain Ribosomal protein L7/12, oligomerisation (N-terminal) domain
e6ydwHL1 HL:64-89 Ribosomal protein L7/12, oligomerisation (N-terminal) domain Ribosomal protein L7/12, oligomerisation (N-terminal) domain Ribosomal protein L7/12, oligomerisation (N-terminal) domain
e6ydwLL1 LL:129-198 ClpS-like ClpS-related ClpS-related