Domain ID e6yssy1

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  • A: a+b two layers
  • X: dsRBD-like
  • H: Peptidyl-tRNA hydrolase domain-like
  • T: Peptidyl-tRNA hydrolase domain-like
  • F: RF-1
UID: 002644546
Type: Automatic domain
Parent: e1gqeA3
Range: y:2-140
Ligands: MG
PDB: 6yss
PDB Description: Alternative stalled-ribosome rescue factor B
Species:

Structure of domain e6yssy1

Domains in the same chain:

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e6yssy1 y:2-140 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like

Domains in the same PDB:

e6yss01 0:1-56 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6yss11 1:3-52 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6yss21 2:1-46 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e6yss31 3:1-64 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e6yss41 4:1-38 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e6yss51 5:1-131 Alpha-beta plaits Ribosomal protein L10-like Ribosomal protein L10-like
e6yss61 6:1-66 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e6yssb1 b:8-225 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e6yssc2 c:1-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e6yssc1 c:107-206 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e6yssC1 C:1-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6yssC2 C:125-271 SH3 SH3 SH3
e6yssd1 d:1-205 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e6yssD1 D:1-209 cradle loop barrel RIFT-related Alanine racemase-C
e6ysse1 e:9-77 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e6ysse2 e:78-165 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6yssE1 E:1-201 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e6yssf1 f:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e6yssF1 F:1-177 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e6yssg1 g:1-151 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e6yssG1 G:1-81 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e6yssG2 G:82-176 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e6yssh2 h:1-65 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e6yssh1 h:66-129 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e6yssH1 H:1-55 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e6yssH2 H:55-149 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e6yssi1 i:3-129 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6yssI2 I:1-71 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e6yssI1 I:72-141 HTH HTH Ribosomal protein L11, C-terminal domain
e6yssj1 j:5-102 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e6yssJ1 J:1-142 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e6yssk1 k:12-127 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e6yssK1 K:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e6yssl1 l:1-123 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6yssL1 L:2-144 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e6yssm1 m:1-114 HhH/H2TH H2TH H2TH
e6yssM1 M:1-136 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e6yssn1 n:1-101 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e6yssN1 N:1-120 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e6ysso1 o:1-88 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e6yssO1 O:2-117 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e6yssp1 p:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e6yssP1 P:1-114 SH3 SH3 SH3
e6yssq1 q:3-82 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6yssQ1 Q:1-117 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e6yssr1 r:9-73 HTH HTH tri-helical
e6yssR1 R:1-103 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e6ysss1 s:1-82 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e6yssS1 S:1-110 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e6ysst1 t:2-86 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e6yssT1 T:1-93 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e6yssu1 u:3-67 30S ribosomal protein S21 30S ribosomal protein S21 30S ribosomal protein S21
e6yssU1 U:1-102 SH3 SH3 SH3
e6yssV1 V:1-94 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e6yssW1 W:7-81 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e6yssX1 X:1-77 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e6yssy1 y:2-140 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like
e6yssY1 Y:1-63 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e6yssZ1 Z:1-58 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e