Domain ID e6z9pY2

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  • A: a+b two layers
  • X: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
  • H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
  • T: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
  • F: Unmapped domains
UID: 002675403
Type: Automatic domain
Parent: e1l9uD6
Range: Y:811-894
Ligands: ZN
PDB: 6z9p
PDB Description: DNA-directed RNA polymerase subunit beta'
Species:

Structure of domain e6z9pY2

Domains in the same chain:

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e6z9pY4 Y:16-341 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e6z9pY7 Y:334-498 cradle loop barrel RIFT-related double psi
e6z9pY1 Y:499-638 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e6z9pY6 Y:639-810 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e6z9pY2 Y:811-894 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6z9pY3 Y:895-931,Y:1214-1373 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e6z9pY8 Y:932-1022 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6z9pY5 Y:1023-1131 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6z9pY9 Y:1132-1215 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif

Domains in the same PDB:

e6z9pa1 a:1-47 LEM/SAP HeH motif-like LEM/SAP HeH motif LEM/SAP HeH motif
e6z9pa3 a:48-128 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6z9pa2 a:129-417 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6z9pA1 A:1-127 Transcription factor NusA, N-terminal domain Transcription factor NusA, N-terminal domain Transcription factor NusA, N-terminal domain
e6z9pA2 A:126-199 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6z9pA3 A:199-278 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e6z9pA4 A:279-346 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e6z9pA6 A:345-422 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e6z9pA5 A:423-495 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e6z9pb3 b:1-47 LEM/SAP HeH motif-like LEM/SAP HeH motif LEM/SAP HeH motif
e6z9pb1 b:48-128 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6z9pb2 b:129-417 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6z9pc1 c:1-47 LEM/SAP HeH motif-like LEM/SAP HeH motif LEM/SAP HeH motif
e6z9pc3 c:48-128 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6z9pc2 c:129-417 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6z9pd3 d:1-47 LEM/SAP HeH motif-like LEM/SAP HeH motif LEM/SAP HeH motif
e6z9pd1 d:48-128 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6z9pd2 d:129-417 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6z9pe3 e:1-47 LEM/SAP HeH motif-like LEM/SAP HeH motif LEM/SAP HeH motif
e6z9pe1 e:48-128 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6z9pe2 e:129-417 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6z9pf3 f:1-47 LEM/SAP HeH motif-like LEM/SAP HeH motif LEM/SAP HeH motif
e6z9pf2 f:48-128 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6z9pf1 f:129-417 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6z9pG1 G:6-117 Alpha-beta plaits N-utilization substance G protein NusG, N-terminal domain N-utilization substance G protein NusG, N-terminal domain
e6z9pU2 U:4-52,U:179-236 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6z9pU3 U:53-178 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e6z9pU1 U:237-325 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e6z9pV1 V:5-52,V:174-239 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6z9pV2 V:53-173 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e6z9pW1 W:2-80 RPB6/omega subunit-like RPB6/omega subunit-like RNA polymerase omega subunit
e6z9pX4 X:2-151,X:452-577 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6z9pX7 X:152-225,X:343-451 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e6z9pX6 X:226-234,X:289-342 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6z9pX1 X:235-288 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6z9pX3 X:578-712 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e6z9pX10 X:713-790 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6z9pX8 X:791-827,X:1063-1239 cradle loop barrel RIFT-related double psi
e6z9pX5 X:828-938,X:1045-1062 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6z9pX2 X:939-1044 Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit
e6z9pX9 X:1240-1341 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6z9pY4 Y:16-341 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e6z9pY7 Y:334-498 cradle loop barrel RIFT-related double psi
e6z9pY1 Y:499-638 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e6z9pY6 Y:639-810 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e6z9pY2 Y:811-894 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6z9pY3 Y:895-931,Y:1214-1373 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e6z9pY8 Y:932-1022 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6z9pY5 Y:1023-1131 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6z9pY9 Y:1132-1215 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif