ECOD: domain e6z9rb1

Domain ID e6z9rb1

A: alpha arrays
X: LEM/SAP HeH motif-like
H: LEM/SAP HeH motif
T: LEM/SAP HeH motif
F: Rho_N

UID:	002675468
Type:	Automatic domain
Parent:	e1a62A2
Range:	b:1-47
PDB:	6z9r
PDB Description:	Transcription termination factor Rho
Species:

Domains in the same chain:

Download Pymol

e6z9rb1	b:1-47	LEM/SAP HeH motif-like	LEM/SAP HeH motif	LEM/SAP HeH motif
e6z9rb2	b:48-128	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6z9rb3	b:129-417	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Domains in the same PDB:

e6z9ra2	a:1-47	LEM/SAP HeH motif-like	LEM/SAP HeH motif	LEM/SAP HeH motif
e6z9ra1	a:48-128	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6z9ra3	a:129-417	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e6z9rA6	A:1-127	Transcription factor NusA, N-terminal domain	Transcription factor NusA, N-terminal domain	Transcription factor NusA, N-terminal domain
e6z9rA3	A:126-199	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6z9rA5	A:199-278	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e6z9rA1	A:279-346	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e6z9rA2	A:345-422	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e6z9rA4	A:423-495	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e6z9rb1	b:1-47	LEM/SAP HeH motif-like	LEM/SAP HeH motif	LEM/SAP HeH motif
e6z9rb2	b:48-128	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6z9rb3	b:129-417	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e6z9rc2	c:1-47	LEM/SAP HeH motif-like	LEM/SAP HeH motif	LEM/SAP HeH motif
e6z9rc1	c:48-128	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6z9rc3	c:129-417	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e6z9rd1	d:1-47	LEM/SAP HeH motif-like	LEM/SAP HeH motif	LEM/SAP HeH motif
e6z9rd3	d:48-128	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6z9rd2	d:129-417	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e6z9re1	e:1-47	LEM/SAP HeH motif-like	LEM/SAP HeH motif	LEM/SAP HeH motif
e6z9re3	e:48-128	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6z9re2	e:129-417	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e6z9rf3	f:1-47	LEM/SAP HeH motif-like	LEM/SAP HeH motif	LEM/SAP HeH motif
e6z9rf1	f:48-128	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6z9rf2	f:129-417	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e6z9rG1	G:6-117	Alpha-beta plaits	N-utilization substance G protein NusG, N-terminal domain	N-utilization substance G protein NusG, N-terminal domain
e6z9rU2	U:4-52,U:174-238	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e6z9rU1	U:53-173	Ribosomal protein TL5/L25 C-terminal domain-like	Insert subdomain of RNA polymerase alpha subunit	Insert subdomain of RNA polymerase alpha subunit
e6z9rV3	V:5-52,V:179-236	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e6z9rV1	V:53-178	Ribosomal protein TL5/L25 C-terminal domain-like	Insert subdomain of RNA polymerase alpha subunit	Insert subdomain of RNA polymerase alpha subunit
e6z9rV2	V:237-325	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e6z9rW1	W:2-80	RPB6/omega subunit-like	RPB6/omega subunit-like	RNA polymerase omega subunit
e6z9rX6	X:2-151,X:452-577	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6z9rX7	X:152-225,X:343-451	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase
e6z9rX3	X:226-234,X:289-342	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6z9rX9	X:235-288	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6z9rX2	X:578-712	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase
e6z9rX8	X:713-790	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6z9rX1	X:791-827,X:1063-1239	cradle loop barrel	RIFT-related	double psi
e6z9rX5	X:828-938,X:1045-1062	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6z9rX10	X:939-1044	Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit	Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit	Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit
e6z9rX4	X:1240-1341	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6z9rY9	Y:16-341	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit
e6z9rY6	Y:334-498	cradle loop barrel	RIFT-related	double psi
e6z9rY5	Y:499-638	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit
e6z9rY8	Y:639-810	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit
e6z9rY2	Y:811-894	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6z9rY3	Y:895-931,Y:1214-1373	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit
e6z9rY7	Y:932-1022	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6z9rY1	Y:1023-1131	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6z9rY4	Y:1132-1215	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif