ECOD: domain e7abir3

Domain ID e7abir3

A: a+b two layers
X: Ribosomal protein S5 domain 2-like
H: Ribosomal protein S5 domain 2-like
T: Ribosomal protein S5 domain 2-like
F: EFG_IV

UID:	002698635
Type:	Automatic domain
Parent:	e2dy1A4
Range:	r:660-828
PDB:	7abi
PDB Description:	116 kDa U5 small nuclear ribonucleoprotein component
Species:

Domains in the same chain:

Download Pymol

Domains in the same PDB:

e7abi01	0:243-370	SMAD/FHA domain	SMAD/FHA domain	SMAD/FHA domain
e7abi11	1:2-123	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e7abi72	7:60-179	HTH	HTH	winged
e7abi71	7:274-393	SH3	SH3	SH3
e7abia1	a:26-114	SH3	SH3	SH3
e7abiA2	A:63-810	Pre-mRNA-splicing factor 8 N-terminal domain	Pre-mRNA-splicing factor 8 N-terminal domain	Pre-mRNA-splicing factor 8 N-terminal domain
e7abiA6	A:811-1182	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e7abiA4	A:1183-1502	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases
e7abiA1	A:1528-1754	Restriction endonuclease-like	Restriction endonuclease-like	Restriction endonuclease-like
e7abiA5	A:1755-2016,A:2057-2066	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e7abiA3	A:2067-2318	Cytidine deaminase-like	Cytidine deaminase-like	Cytidine deaminase-like
e7abib1	b:4-76	SH3	SH3	SH3
e7abiB2	B:3-84	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e7abiB1	B:85-94,B:149-225	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e7abic1	c:15-92	SH3	SH3	SH3
e7abid1	d:4-72	SH3	SH3	SH3
e7abiD1	D:56-357	beta-propeller-like	beta-propeller	7-bladed
e7abie1	e:4-81	SH3	SH3	SH3
e7abiE4	E:1-403	beta-propeller-like	beta-propeller	7-bladed
e7abiE3	E:404-441,E:773-1132	beta-propeller-like	beta-propeller	7-bladed
e7abiE2	E:442-772	beta-propeller-like	beta-propeller	7-bladed
e7abiE1	E:1133-1217	HTH	HTH	tri-helical
e7abif1	f:7-86	SH3	SH3	SH3
e7abiF1	F:19-86	beta-beta-alpha zinc fingers	beta-beta-alpha zinc fingers	beta-beta-alpha zinc fingers
e7abiF2	F:87-91,F:114-209	HSP20-like	Pre-mRNA-splicing factor PRP11 C-terminal domain	Pre-mRNA-splicing factor PRP11 C-terminal domain
e7abig1	g:2-95	SH3	SH3	SH3
e7abiG1	G:181-500	beta-propeller-like	beta-propeller	7-bladed
e7abih1	h:13-115	SH3	SH3	SH3
e7abii1	i:4-75	SH3	SH3	SH3
e7abiI1	I:1-176	Repetitive alpha hairpins	Pre-mRNA-splicing factor 38A	Pre-mRNA-splicing factor 38A
e7abij1	j:11-91	SH3	SH3	SH3
e7abik1	k:4-76	SH3	SH3	SH3
e7abil1	l:2-84	SH3	SH3	SH3
e7abiL2	L:8-64	HTH	HTH	tri-helical
e7abiL1	L:62-110,L:147-159	HTH	HTH	tri-helical
e7abim1	m:6-87	SH3	SH3	SH3
e7abiM1	M:33-738	Repetitive alpha hairpins	ARM repeat	ARM repeat
e7abin1	n:1-80	SH3	SH3	SH3
e7abiN1	N:79-134	beta-beta-alpha zinc fingers	beta-beta-alpha zinc fingers	beta-beta-alpha zinc fingers
e7abio1	o:1-82	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e7abio2	o:141-301	Cyclophilin-like	Cyclophilin-like	Cyclophilin-like
e7abiO1	O:215-462	Repetitive alpha hairpins	ARM repeat	ARM repeat
e7abip2	p:47-104	Surp module (SWAP domain)	Surp module (SWAP domain)	Surp module (SWAP domain)
e7abip1	p:105-110,p:160-219	Surp module (SWAP domain)	Surp module (SWAP domain)	Surp module (SWAP domain)
e7abiP1	P:15-89	RING/U-box-like	RING/U-box-like	FYVE/PHD zinc finger
e7abiP2	P:90-100,P:145-220	CCCH zinc finger	CCCH zinc finger	CCCH zinc finger
e7abiP3	P:221-308	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e7abiq1	q:1-73	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e7abiQ1	Q:3-140	Pre-mRNA-splicing factor BUD31	Pre-mRNA-splicing factor BUD31	Pre-mRNA-splicing factor BUD31
e7abir5	r:63-439	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e7abir2	r:440-580	cradle loop barrel	RIFT-related	Alanine racemase-C
e7abir4	r:581-659	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e7abir3	r:660-828	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e7abir1	r:829-957	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e7abis8	s:404-682	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e7abis5	s:683-887	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e7abis10	s:888-993	HTH	HTH	winged
e7abis12	s:994-1125	Sec63 N-terminal subdomain-like	Sec63 N-terminal subdomain-like	Sec63 N-terminal subdomain-like
e7abis1	s:1126-1180	HhH/H2TH	SAM-like subdomain in Sec63-like proteins	SAM-like subdomain in Sec63-like proteins
e7abis9	s:1181-1311	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e7abis11	s:1312-1520	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e7abis4	s:1521-1721	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e7abis2	s:1722-1824	HTH	HTH	winged
e7abis3	s:1825-1957	Sec63 N-terminal subdomain-like	Sec63 N-terminal subdomain-like	Sec63 N-terminal subdomain-like
e7abis7	s:1958-2015	HhH/H2TH	SAM-like subdomain in Sec63-like proteins	SAM-like subdomain in Sec63-like proteins
e7abis6	s:2016-2125	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e7abiS1	S:209-563	Repetitive alpha hairpins	ARM repeat	ARM repeat
e7abit3	t:43-93	RING/U-box-like	RING/U-box-like	RING/U-box
e7abit2	t:116-159	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e7abit1	t:280-437	Cyclophilin-like	Cyclophilin-like	Cyclophilin-like
e7abiu1	u:118-129,u:394-1304	Repetitive alpha hairpins	ARM repeat	ARM repeat
e7abiU3	U:19-415	Repetitive alpha hairpins	ARM repeat	ARM repeat
e7abiU4	U:416-492,U:660-706,U:795-1134	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e7abiU5	U:493-659	cradle loop barrel	RIFT-related	Alanine racemase-C
e7abiU2	U:707-753,U:773-794	Spliceosomal helicase Aquarius insert domain	Spliceosomal helicase Aquarius insert domain	Spliceosomal helicase Aquarius insert domain
e7abiU1	U:1135-1381	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e7abiw1	w:12-89	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e7abiW1	W:2-163	Single-stranded right-handed beta-helix	Leucine-rich repeats	Leucine-rich repeats
e7abix1	x:1-79	RDS3 complex subunit 10	RDS3 complex subunit 10	RDS3 complex subunit 10
e7abiy1	y:2-101	Glucocorticoid receptor-like	LIM domain-like	PHD finger-like domain-containing protein 5A
e7abiY1	Y:32-126	PWI domain-like	PWI domain	PWI domain
e7abiz1	z:12-119	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD