ECOD: domain e7aocA8

Domain ID e7aocA8

Download files:

A: a+b complex topology
X: N-terminal domain in RNA-polymerase beta-prime subunit
H: N-terminal domain in RNA-polymerase beta-prime subunit
T: N-terminal domain in RNA-polymerase beta-prime subunit
F: RNA_pol_Rpb1_1

UID:	002700172
Type:	Automatic domain
Parent:	e1twfA4
Range:	A:1-142,A:173-258,A:321-471
Ligands:	ZN
PDB:	7aoc
PDB Description:	DNA-directed RNA polymerase I subunit rpa1
Species:

Domains in the same chain:

e7aocA8	A:1-142,A:173-258,A:321-471	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit
e7aocA3	A:472-513,A:597-681	cradle loop barrel	RIFT-related	double psi
e7aocA7	A:514-596	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e7aocA9	A:682-841	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit
e7aocA5	A:842-1066	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit
e7aocA2	A:1067-1189	helical domain in yeast RNA-polymerases	third helical domain in yeast RNA-polymerase I RPA190 subunit	third helical domain in yeast RNA-polymerase I RPA190 subunit
e7aocA4	A:1190-1243,A:1568-1681	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit
e7aocA1	A:1244-1270,A:1518-1567	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7aocA6	A:1271-1345,A:1476-1517	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit

Domains in the same PDB:

e7aocA8	A:1-142,A:173-258,A:321-471	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit
e7aocA3	A:472-513,A:597-681	cradle loop barrel	RIFT-related	double psi
e7aocA7	A:514-596	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e7aocA9	A:682-841	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit
e7aocA5	A:842-1066	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit
e7aocA2	A:1067-1189	helical domain in yeast RNA-polymerases	third helical domain in yeast RNA-polymerase I RPA190 subunit	third helical domain in yeast RNA-polymerase I RPA190 subunit
e7aocA4	A:1190-1243,A:1568-1681	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit
e7aocA1	A:1244-1270,A:1518-1567	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7aocA6	A:1271-1345,A:1476-1517	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7aocB6	B:1-188,B:376-523	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7aocB1	B:189-375	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase
e7aocB4	B:524-631	inserted a+b domain in yeast RNA polymerase beta subunit	inserted a+b domain in yeast RNA polymerase beta subunit	inserted a+b domain in yeast RNA polymerase beta subunit
e7aocB7	B:632-746	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase
e7aocB5	B:747-783,B:897-1025	cradle loop barrel	RIFT-related	double psi
e7aocB3	B:784-896	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e7aocB2	B:1026-1174	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7aocC2	C:29-81,C:229-345	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e7aocC1	C:82-228	Ribosomal protein TL5/L25 C-terminal domain-like	Insert subdomain of RNA polymerase alpha subunit	Insert subdomain of RNA polymerase alpha subunit
e7aocD1	D:12-59	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e7aocE2	E:4-138	Restriction endonuclease-like	Eukaryotic RPB5 N-terminal domain	Eukaryotic RPB5 N-terminal domain
e7aocE1	E:139-210	RPB5-like RNA polymerase subunit	RPB5-like RNA polymerase subunit	RPB5-like RNA polymerase subunit
e7aocF1	F:61-142	RPB6/omega subunit-like	RPB6/omega subunit-like	RPB6
e7aocG1	G:3-82	Dodecin subunit-like	Flavin-binding protein dodecin-like	Flavin-binding protein dodecin-like
e7aocG2	G:83-172	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e7aocH1	H:3-125	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e7aocI1	I:6-62	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e7aocJ1	J:1-68	HTH	RPB10	RPB10
e7aocK1	K:20-114	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e7aocL1	L:19-63	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related