Domain ID e7eg9o7

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: double psi
  • F: RNA_pol_Rpb1_2
UID: 002729615
Type: Automatic domain
Parent: e1twfA1
Range: o:351-388,o:450-533
Ligands: MG
PDB: 7eg9
PDB Description: RPB1
Species:

Structure of domain e7eg9o7

Domains in the same chain:

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e7eg9o1 o:11-155,o:181-350 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e7eg9o7 o:351-388,o:450-533 cradle loop barrel RIFT-related double psi
e7eg9o6 o:389-449 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e7eg9o2 o:534-685 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e7eg9o3 o:686-894 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e7eg9o8 o:895-1082 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e7eg9o9 o:1083-1135,o:1361-1487 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e7eg9o4 o:1136-1164,o:1298-1360 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7eg9o5 o:1165-1297 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit

Domains in the same PDB:

e7eg9B3 B:19-254 Baculovirus p35 protein-related Baculovirus p35 protein-related Baculovirus p35 protein-related
e7eg9B1 B:255-648 Zincin-like Metalloproteases ("zincins") catalytic domain Metalloproteases ("zincins") catalytic domain
e7eg9B2 B:649-988 Repetitive alpha hairpins ARM repeat ARM repeat
e7eg9e2 e:202-343,e:363-380 Taf5 N-terminal domain-like Taf5 N-terminal domain-like Taf5 N-terminal domain-like
e7eg9e1 e:417-799 beta-propeller-like beta-propeller 8-bladed
e7eg9E2 E:209-378 Taf5 N-terminal domain-like Taf5 N-terminal domain-like Taf5 N-terminal domain-like
e7eg9E1 E:417-798 beta-propeller-like beta-propeller 8-bladed
e7eg9j1 j:114-218 Histone-like Histone-related Histone
e7eg9J1 J:114-216 Histone-like Histone-related Histone
e7eg9k1 k:114-211 Histone-like Histone-related Histone
e7eg9L1 L:55-130 Histone-like Histone-related Histone
e7eg9o1 o:11-155,o:181-350 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e7eg9o7 o:351-388,o:450-533 cradle loop barrel RIFT-related double psi
e7eg9o6 o:389-449 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e7eg9o2 o:534-685 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e7eg9o3 o:686-894 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e7eg9o8 o:895-1082 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e7eg9o9 o:1083-1135,o:1361-1487 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e7eg9o4 o:1136-1164,o:1298-1360 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7eg9o5 o:1165-1297 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7eg9O2 O:3-53 TFIIA, alpha-helical domain TFIIA, alpha-helical domain TFIIA, alpha-helical domain
e7eg9O1 O:54-99 Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain
e7eg9p6 p:16-67,p:87-200,p:392-528 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7eg9p7 p:201-391 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e7eg9p3 p:529-618 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e7eg9p4 p:619-768 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e7eg9p1 p:769-805,p:930-1053 cradle loop barrel RIFT-related double psi
e7eg9p5 p:806-929 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e7eg9p2 p:1054-1174 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7eg9P1 P:161-256 TBP-like TATA-box binding protein-like TATA-box binding protein-like
e7eg9P2 P:257-337 TBP-like TATA-box binding protein-like TATA-box binding protein-like
e7eg9q1 q:2-42,q:179-271 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e7eg9q2 q:43-178 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e7eg9Q2 Q:9-63,Q:310-321 TFIIA, alpha-helical domain TFIIA, alpha-helical domain TFIIA, alpha-helical domain
e7eg9Q1 Q:322-376 Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain
e7eg9r1 r:14-141 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e7eg9R2 R:13-49 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7eg9R1 R:106-207 HTH HTH Cyclin-like
e7eg9R3 R:208-316 HTH HTH Cyclin-like
e7eg9s2 s:2-138 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e7eg9s1 s:139-210 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e7eg9S1 S:5-54,S:93-176 triple barrel triple barrel Rap30/74 interaction domains-like
e7eg9t1 t:49-127 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e7eg9T1 T:2-119 triple barrel triple barrel Rap30/74 interaction domains-like
e7eg9u1 u:1-77 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e7eg9u2 u:78-171 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e7eg9U2 U:11-100,U:175-203 HTH HTH winged
e7eg9U1 U:101-174 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7eg9v1 v:2-149 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e7eg9V1 V:68-146 HTH HTH winged
e7eg9V2 V:147-207 HTH HTH winged
e7eg9V3 V:208-239 HTH HTH winged
e7eg9w1 w:12-59 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7eg9w2 w:60-125 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7eg9x1 x:1-64 HTH RPB10 RPB10
e7eg9y1 y:1-117 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e7eg9z1 z:15-58 Rubredoxin-like Rubredoxin-related Rubredoxin-related