Domain ID e7nvrB6

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  • A: a+b complex topology
  • X: N-terminal domain in beta subunit of DNA dependent RNA-polymerase
  • H: N-terminal domain in beta subunit of DNA dependent RNA-polymerase
  • T: N-terminal domain in beta subunit of DNA dependent RNA-polymerase
  • F: RNA_pol_Rpb2_1,RNA_pol_Rpb2_3
UID: 002734759
Type: Automatic domain
Parent: e4c2mB1
Range: B:15-67,B:87-200,B:392-528
PDB: 7nvr
PDB Description: DNA-directed RNA polymerase subunit beta
Species:

Structure of domain e7nvrB6

Domains in the same chain:

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e7nvrB6 B:15-67,B:87-200,B:392-528 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7nvrB2 B:201-391 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e7nvrB4 B:529-618 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e7nvrB3 B:619-768 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e7nvrB5 B:769-805,B:930-1053 cradle loop barrel RIFT-related double psi
e7nvrB7 B:806-929 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e7nvrB1 B:1054-1174 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase

Domains in the same PDB:

e7nvr01 0:1-243 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e7nvr03 0:244-446 XPD arch domain XPD arch domain XPD arch domain
e7nvr02 0:447-728 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e7nvr42 4:8-72,4:95-264 HAD domain-like HAD domain-related vWA-like
e7nvr41 4:265-292 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7nvr51 5:3-68 TFB5-related TFB5-related TFB5-related
e7nvr61 6:7-24,6:53-238 HAD domain-like HAD domain-related vWA-like
e7nvr62 6:239-316 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7nvr63 6:317-387 RING/U-box-like RING/U-box-like Cysteine-rich domain
e7nvr81 8:10-312 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp Protein kinase
e7nvr91 9:1-161 HTH HTH Cyclin-like
e7nvr92 9:162-284 HTH HTH Cyclin-like
e7nvra1 a:8-150 Mediator of RNA polymerase II transcription subunit 6 Mediator of RNA polymerase II transcription subunit 6 Mediator of RNA polymerase II transcription subunit 6
e7nvrA4 A:11-155,A:182-350 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e7nvrA1 A:351-388,A:450-533 cradle loop barrel RIFT-related double psi
e7nvrA5 A:389-449 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e7nvrA6 A:534-685 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e7nvrA7 A:686-894 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e7nvrA3 A:895-1082 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e7nvrA8 A:1083-1135,A:1361-1487 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e7nvrA2 A:1136-1164,A:1298-1360 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7nvrA9 A:1165-1297 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7nvrB6 B:15-67,B:87-200,B:392-528 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7nvrB2 B:201-391 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e7nvrB4 B:529-618 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e7nvrB3 B:619-768 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e7nvrB5 B:769-805,B:930-1053 cradle loop barrel RIFT-related double psi
e7nvrB7 B:806-929 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e7nvrB1 B:1054-1174 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7nvrC1 C:2-42,C:179-271 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e7nvrC2 C:43-178 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e7nvrD1 D:14-141 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e7nvre1 e:16-202 mRNA triphosphatase CET1-related mRNA triphosphatase CET1-related mRNA triphosphatase CET1-related
e7nvrE2 E:2-138 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e7nvrE1 E:139-210 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e7nvrf1 f:2-204 mRNA triphosphatase CET1-related mRNA triphosphatase CET1-related mRNA triphosphatase CET1-related
e7nvrF1 F:49-127 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e7nvrg1 g:11-140 Mediator of RNA polymerase II transcription subunit 22 Mediator of RNA polymerase II transcription subunit 22 Mediator of RNA polymerase II transcription subunit 22
e7nvrG1 G:1-77 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e7nvrG2 G:78-171 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e7nvrH1 H:2-149 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e7nvrI2 I:12-59 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7nvrI1 I:60-125 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7nvrJ1 J:1-64 HTH RPB10 RPB10
e7nvrK1 K:1-115 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e7nvrL1 L:15-58 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7nvrM3 M:14-54 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7nvrM1 M:106-207 HTH HTH Cyclin-like
e7nvrM2 M:208-316 HTH HTH Cyclin-like
e7nvrn1 n:3-134 Mediator hinge subcomplex-like Mediator hinge subcomplex-like RNA polymerase II holoenzyme component SRB7 (MED21)
e7nvro1 o:15-105 Mediator of RNA polymerase II transcription submodule Med7N/31 Mediator of RNA polymerase II transcription submodule Med7N/31 Mediator of RNA polymerase II transcription submodule Med7N/31
e7nvrO1 O:159-256 TBP-like TATA-box binding protein-like TATA-box binding protein-like
e7nvrO2 O:257-337 TBP-like TATA-box binding protein-like TATA-box binding protein-like
e7nvrQ1 Q:5-54,Q:93-180 triple barrel triple barrel Rap30/74 interaction domains-like
e7nvrU1 U:9-51,U:308-321 TFIIA, alpha-helical domain TFIIA, alpha-helical domain TFIIA, alpha-helical domain
e7nvrU2 U:322-376 Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain
e7nvrV1 V:1-53 TFIIA, alpha-helical domain TFIIA, alpha-helical domain TFIIA, alpha-helical domain
e7nvrV2 V:54-99 Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain
e7nvrW2 W:10-103 HTH HTH winged
e7nvrW1 W:104-196,W:274-288 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7nvrX3 X:72-146 HTH HTH winged
e7nvrX2 X:147-209 HTH HTH winged
e7nvrX1 X:210-242 HTH HTH winged