Domain ID e7nvsE1

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  • A: a+b two layers
  • X: RPB5-like RNA polymerase subunit
  • H: RPB5-like RNA polymerase subunit
  • T: RPB5-like RNA polymerase subunit
  • F: RNA_pol_Rpb5_C
UID: 002734815
Type: Automatic domain
Parent: e1dzfA1
Range: E:139-210
PDB: 7nvs
PDB Description: DNA-directed RNA polymerase II subunit E
Species:

Structure of domain e7nvsE1

Domains in the same chain:

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e7nvsE2 E:2-138 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e7nvsE1 E:139-210 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit

Domains in the same PDB:

e7nvsA4 A:11-155,A:182-350 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e7nvsA5 A:351-388,A:450-533 cradle loop barrel RIFT-related double psi
e7nvsA8 A:389-449 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e7nvsA3 A:534-685 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e7nvsA1 A:686-894 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e7nvsA6 A:895-1082 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e7nvsA9 A:1083-1135,A:1361-1487 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e7nvsA7 A:1136-1164,A:1298-1360 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7nvsA2 A:1165-1297 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7nvsB7 B:15-67,B:87-200,B:392-528 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7nvsB2 B:201-391 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e7nvsB6 B:529-618 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e7nvsB1 B:619-768 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e7nvsB4 B:769-805,B:930-1053 cradle loop barrel RIFT-related double psi
e7nvsB5 B:806-929 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e7nvsB3 B:1054-1174 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7nvsC1 C:2-42,C:179-271 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e7nvsC2 C:43-178 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e7nvsD1 D:14-141 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e7nvsE2 E:2-138 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e7nvsE1 E:139-210 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e7nvsF1 F:49-127 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e7nvsG2 G:1-77 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e7nvsG1 G:78-171 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e7nvsH1 H:2-149 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e7nvsI1 I:12-59 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7nvsI2 I:60-125 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7nvsJ1 J:1-64 HTH RPB10 RPB10
e7nvsK1 K:1-115 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e7nvsL1 L:15-58 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7nvsM3 M:14-54 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7nvsM2 M:106-207 HTH HTH Cyclin-like
e7nvsM1 M:208-316 HTH HTH Cyclin-like
e7nvsO2 O:159-255 TBP-like TATA-box binding protein-like TATA-box binding protein-like
e7nvsO1 O:256-337 TBP-like TATA-box binding protein-like TATA-box binding protein-like
e7nvsQ1 Q:5-54,Q:93-180 triple barrel triple barrel Rap30/74 interaction domains-like
e7nvsU2 U:9-51,U:308-321 TFIIA, alpha-helical domain TFIIA, alpha-helical domain TFIIA, alpha-helical domain
e7nvsU1 U:322-376 Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain
e7nvsV1 V:1-53 TFIIA, alpha-helical domain TFIIA, alpha-helical domain TFIIA, alpha-helical domain
e7nvsV2 V:54-99 Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain
e7nvsW2 W:10-103 HTH HTH winged
e7nvsW1 W:104-196 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7nvsX3 X:72-146 HTH HTH winged
e7nvsX1 X:147-209 HTH HTH winged
e7nvsX2 X:210-242 HTH HTH winged