Domain ID e7nvyA4

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  • A: a+b two layers
  • X: permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
  • H: permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
  • T: permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
  • F: RNA_pol_Rpb1_7
UID: 002734959
Type: Automatic domain
Parent: e1twfA3
Range: A:1165-1297
PDB: 7nvy
PDB Description: RPB1
Species:

Structure of domain e7nvyA4

Domains in the same chain:

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e7nvyA2 A:11-155,A:182-350 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e7nvyA5 A:351-388,A:450-533 cradle loop barrel RIFT-related double psi
e7nvyA7 A:389-449 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e7nvyA8 A:534-685 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e7nvyA1 A:686-894 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e7nvyA9 A:895-1082 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e7nvyA3 A:1083-1135,A:1361-1487 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e7nvyA6 A:1136-1164,A:1298-1360 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7nvyA4 A:1165-1297 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit

Domains in the same PDB:

e7nvy01 0:1-243 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e7nvy03 0:244-446 XPD arch domain XPD arch domain XPD arch domain
e7nvy02 0:447-728 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e7nvy31 3:1-69 RING/U-box-like RING/U-box-like RING/U-box
e7nvy32 3:70-149 beta-beta-alpha zinc fingers beta-beta-alpha zinc fingers beta-beta-alpha zinc fingers
e7nvy42 4:8-72,4:95-264 HAD domain-like HAD domain-related vWA-like
e7nvy41 4:265-292 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7nvy51 5:3-68 TFB5-related TFB5-related TFB5-related
e7nvy63 6:7-24,6:53-238 HAD domain-like HAD domain-related vWA-like
e7nvy62 6:239-316 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7nvy61 6:317-387 RING/U-box-like RING/U-box-like Cysteine-rich domain
e7nvyA2 A:11-155,A:182-350 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e7nvyA5 A:351-388,A:450-533 cradle loop barrel RIFT-related double psi
e7nvyA7 A:389-449 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e7nvyA8 A:534-685 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e7nvyA1 A:686-894 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e7nvyA9 A:895-1082 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e7nvyA3 A:1083-1135,A:1361-1487 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e7nvyA6 A:1136-1164,A:1298-1360 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7nvyA4 A:1165-1297 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7nvyB3 B:15-67,B:87-200,B:392-528 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7nvyB2 B:201-391 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e7nvyB4 B:529-618 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e7nvyB5 B:619-768 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e7nvyB1 B:769-805,B:930-1053 cradle loop barrel RIFT-related double psi
e7nvyB6 B:806-929 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e7nvyB7 B:1054-1174 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7nvyC2 C:2-42,C:179-271 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e7nvyC1 C:43-178 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e7nvyD1 D:14-141 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e7nvyE1 E:2-138 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e7nvyE2 E:139-210 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e7nvyF1 F:49-127 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e7nvyG2 G:1-77 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e7nvyG1 G:78-171 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e7nvyH1 H:2-149 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e7nvyI1 I:12-59 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7nvyI2 I:60-125 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7nvyJ1 J:1-64 HTH RPB10 RPB10
e7nvyK1 K:1-115 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e7nvyL1 L:15-58 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7nvyM1 M:14-54 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7nvyM3 M:106-207 HTH HTH Cyclin-like
e7nvyM2 M:208-316 HTH HTH Cyclin-like
e7nvyO1 O:159-256 TBP-like TATA-box binding protein-like TATA-box binding protein-like
e7nvyO2 O:257-337 TBP-like TATA-box binding protein-like TATA-box binding protein-like
e7nvyQ1 Q:5-54,Q:93-180 triple barrel triple barrel Rap30/74 interaction domains-like
e7nvyU1 U:9-51,U:308-321 TFIIA, alpha-helical domain TFIIA, alpha-helical domain TFIIA, alpha-helical domain
e7nvyU2 U:322-376 Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain
e7nvyV1 V:1-53 TFIIA, alpha-helical domain TFIIA, alpha-helical domain TFIIA, alpha-helical domain
e7nvyV2 V:54-99 Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain
e7nvyW2 W:10-103 HTH HTH winged
e7nvyW1 W:104-196,W:274-288 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7nvyX2 X:72-146 HTH HTH winged
e7nvyX1 X:147-209 HTH HTH winged
e7nvyX3 X:210-242 HTH HTH winged